RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 COLEC10Q9Y6Z7 277 aa6.25□□□□□ -1.41
CTNNA1-216ENST00000519489 LYSTQ99698 3801 aa6.25□□□□□ -1.41
CTNNA1-216ENST00000519489 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
CTNNA1-216ENST00000519489 MGAT4DA6NG13 374 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 FAM47E-STBD1D6RA91 191 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 KLRC4-KLRK1H3BQV0 150 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 FGF10O15520 208 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 EPPINO95925 133 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 PCSK2P16519 638 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ERCC2P18074 760 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 PDHA2P29803 388 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 SSTR4P31391 388 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 TIMP3P35625 211 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 SLC26A3P40879 764 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 PTPN9P43378 593 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 AP2B1P63010 937 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 FAM27E3Q08E93 113 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 KRT33BQ14525 404 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ETFDHQ16134 617 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 CR1LQ2VPA4 569 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ZC3H12BQ5HYM0 836 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 FNBP1LQ5T0N5 605 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 WLSQ5T9L3 541 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 YOD1Q5VVQ6 348 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 PDPK2PQ6A1A2 396 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 CCBE1Q6UXH8 406 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 DET1Q7L5Y6 550 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 TMC3Q7Z5M5 1100 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ARHGEF39Q8N4T4 335 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 SLC5A8Q8N695 610 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ZNF611Q8N823 705 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 OR2M7Q8NG81 312 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 LILRB1Q8NHL6 650 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ELP5Q8TE02 316 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ANKRD9Q96BM1 317 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ZNF653Q96CK0 615 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ZNF599Q96NL3 588 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 OR52A5Q9H2C5 316 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 NT5MQ9NPB1 228 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ETNK2Q9NVF9 386 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 GAR1Q9NY12 217 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 ACSL5Q9ULC5 683 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 PLAGL1Q9UM63 463 aa6.24□□□□□ -1.41
CTNNA1-216ENST00000519489 SNRNP200O75643 2136 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ATP6AP2A0A1C7CYW4 349 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 CETN3O15182 167 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 KLF4O43474 513 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 FOXS1O43638 330 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 KIAA0513O60268 411 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ITGA10O75578 1167 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ATP6AP2O75787 350 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 SLC4A1P02730 911 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 PRB2P02812 416 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 SLC35G4P0C7Q5 338 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 DANCRP0C864 163 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 GABRA1P14867 456 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 MMP8P22894 467 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 HSPA9P38646 679 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 USP8P40818 1118 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 TPI1P60174 286 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 RPS4XP62701 263 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 BOP1Q14137 746 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 TYSND1Q2T9J0 566 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ANKRD34AQ69YU3 496 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 C11orf87Q6NUJ2 197 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 PRMT9Q6P2P2 845 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 PAOXQ6QHF9 649 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ZNF704Q6ZNC4 412 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 MICALCLQ6ZW33 695 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ZNF550Q7Z398 422 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ZDHHC13Q8IUH4 622 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 CFAP206Q8IYR0 622 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 BANPQ8N9N5 519 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 OR2L2Q8NH16 312 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 FAM216AQ8WUB2 273 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 SOX7Q9BT81 388 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 YIPF2Q9BWQ6 316 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 RAB11FIP5Q9BXF6 653 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 MAGEF1Q9HAY2 307 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 BPIFA1Q9NP55 256 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 ZC3H7BQ9UGR2 993 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 KCNS2Q9ULS6 477 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 DRG1Q9Y295 367 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 DTX4Q9Y2E6 619 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 HIF3AQ9Y2N7 669 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 SPO11Q9Y5K1 396 aa6.23□□□□□ -1.41
CTNNA1-216ENST00000519489 LOC100289279A0A1B0GTE1 492 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 ANKRD66B4E2M5 251 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 HS3ST1O14792 307 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 KPNA5O15131 536 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 SUSD5O60279 629 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 TMCC2O75069 709 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 TGFB1P01137 390 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 THBDP07204 575 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 MMP2P08253 660 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 CES1P23141 567 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 CTSSP25774 331 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 DPP4P27487 766 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 CDC25BP30305 580 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms