RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 CCDC106Q9BWC9 280 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 PANK2Q9BZ23 570 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 MTMR12Q9C0I1 747 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 NOL11Q9H8H0 719 aaKnown RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 GTSE1Q9NYZ3 720 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 CPSF2Q9P2I0 782 aaKnown RBP1.97□□□□□ -2.09
PCM1-208ENST00000518877 ANAPC2Q9UJX6 822 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 TMEM5Q9Y2B1 443 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 FAM169AQ9Y6X4 670 aa1.97□□□□□ -2.09
PCM1-208ENST00000518877 IGLV4-3A0A075B6K6 122 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 H0Y9J4 135 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 TEX28O15482 410 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 TLX2O43763 284 aaPredicted RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 GSRP00390 522 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 KRT6AP02538 564 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 KRT6BP04259 564 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 ATP5BP06576 529 aaKnown RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 ABCB1P08183 1280 aaPredicted RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 GP1BBP13224 206 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 FDPSP14324 419 aaKnown RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 MATR3P43243 847 aaKnown RBP eCLIP1.96□□□□□ -2.1
PCM1-208ENST00000518877 KRT6CP48668 564 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 LMAN1P49257 510 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 CCR3P51677 355 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 SUSD4Q5VX71 490 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 OLFML2AQ68BL7 652 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 CCBE1Q6UXH8 406 aaPredicted RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 CHMP1BQ7LBR1 199 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 CENPVQ7Z7K6 275 aaPredicted RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 OR7A2PQ8NGA2 310 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 ROBO4Q8WZ75 1007 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 SEPHS2Q99611 448 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 ATF6BQ99941 703 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 APOL6Q9BWW8 343 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 MRPL1Q9BYD6 325 aaKnown RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 NYXQ9GZU5 481 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 ADNPQ9H2P0 1102 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 MTHFD2LQ9H903 347 aaPredicted RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 NSMCE4AQ9NXX6 385 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 SLC24A2Q9UI40 661 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 PPIEQ9UNP9 301 aaKnown RBP1.96□□□□□ -2.1
PCM1-208ENST00000518877 HEG1Q9ULI3 1381 aa1.96□□□□□ -2.1
PCM1-208ENST00000518877 TRIM49BA6NDI0 452 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 C2CD4DB7Z1M9 353 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 K7EQD1 137 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 RTCAO00442 366 aaKnown RBP1.95□□□□□ -2.1
PCM1-208ENST00000518877 AP5Z1O43299 807 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 ATP6AP2O75787 350 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 KRT33AO76009 404 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 NXPH4O95158 308 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 NR2F1P10589 423 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 IRF2P14316 349 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 NNMTP40261 264 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 OR3A2P47893 321 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 LIG4P49917 911 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 PPP5CP53041 499 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 ACSM1Q08AH1 577 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 CUL3Q13618 768 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 SNTB1Q13884 538 aaKnown RBP1.95□□□□□ -2.1
PCM1-208ENST00000518877 PTPN14Q15678 1187 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 MAPRE1Q15691 268 aaKnown RBP1.95□□□□□ -2.1
PCM1-208ENST00000518877 NPTX1Q15818 432 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 PHKG1Q16816 387 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 OR4A47Q6IF82 309 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 NHLRC1Q6VVB1 395 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 C3P1Q6ZMU1 363 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 ZBTB49Q6ZSB9 765 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 ZC3H3Q8IXZ2 948 aaKnown RBP1.95□□□□□ -2.1
PCM1-208ENST00000518877 SYT2Q8N9I0 419 aaPredicted RBP1.95□□□□□ -2.1
PCM1-208ENST00000518877 PIK3R3Q92569 461 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 MOB3AQ96BX8 217 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 KLHL5Q96PQ7 755 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 FEVQ99581 238 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 DNAI2Q9GZS0 605 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 ANKRD2Q9GZV1 360 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 ZMYND12Q9H0C1 365 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 CCDC68Q9H2F9 335 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 CDH20Q9HBT6 801 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 PHPT1Q9NRX4 125 aaPredicted RBP1.95□□□□□ -2.1
PCM1-208ENST00000518877 WDR35Q9P2L0 1181 aa1.95□□□□□ -2.1
PCM1-208ENST00000518877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 EDDM13A0A1B0GTR0 161 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 FAM220BPB1ANY3 271 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 O00370 1275 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 DIAPH2O60879 1101 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 STARD3NLO95772 234 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 OR52Z1P0C646 297 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 AKR1B1P15121 316 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 ATP6V1B1P15313 513 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 EPCAMP16422 314 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 DUTP33316 252 aaKnown RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 ZNF75DP51815 510 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 OR1D5P58170 312 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 TRAP1Q12931 704 aaKnown RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 RALGDSQ12967 914 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 ZNF177Q13360 481 aaPredicted RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 ALCAMQ13740 583 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 NONOQ15233 471 aaKnown RBP eCLIP1.94□□□□□ -2.1
PCM1-208ENST00000518877 LBHQ53QV2 105 aaPredicted RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 CFAP161Q6P656 301 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms