RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 FRG2Q64ET8 278 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 BEND5Q7L4P6 421 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 ANKRD13BQ86YJ7 626 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM98AQ8NCA5 519 aaKnown RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CHPT1Q8WUD6 406 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 SCAMP4Q969E2 229 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 POP5Q969H6 163 aaKnown RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 ARMC5Q96C12 935 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 RBM18Q96H35 190 aaKnown RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 FRG2BQ96QU4 278 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 UHRF1Q96T88 793 aaPredicted RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CHCHD6Q9BRQ6 235 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC32A1Q9H598 525 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 POPDC3Q9HBV1 291 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 SAGE1Q9NXZ1 904 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLEC4AQ9UMR7 237 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CPSF4LA6NMK7 179 aaKnown RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 MMP20O60882 483 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CREG1O75629 220 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR5F1O95221 314 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 HOXB6P17509 224 aaKnown RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 FUT4P22083 530 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 ARNTP27540 789 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLCNKAP51800 687 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 EMP3P54852 163 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 GPM6BQ13491 265 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 PYDC2Q56P42 97 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZFAND4Q86XD8 727 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 HS3ST5Q8IZT8 346 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 C1orf52Q8N6N3 182 aaKnown RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF563Q8TA94 476 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 YIPF4Q9BSR8 244 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 ABCG4Q9H172 646 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 RNF186Q9NXI6 227 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 WBP11Q9Y2W2 641 aaKnown RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 HTR3EA5X5Y0 456 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLIC1O00299 241 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 CNMDO75829 334 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 HOXD12P35452 270 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 CBLBQ13191 982 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 SPCS2Q15005 226 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 TEAD2Q15562 447 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 KHDRBS2Q5VWX1 349 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM219BQ5XKK7 198 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 TPRG1Q6ZUI0 275 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 GOLGA7Q7Z5G4 137 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 SNX29P2Q8IUI4 249 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR13F1Q8NGS4 319 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 SH3YL1Q96HL8 342 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 COPS4Q9BT78 406 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ADAP2Q9NPF8 381 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZCCHC3Q9NUD5 404 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 GPR45Q9Y5Y3 372 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 A0A1B0GW55 424 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 A0A1W2PRB8 838 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM155AB1AL88 458 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 LOC110117498-PIK3R3F6TDL0 507 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 KDELR3O43731 214 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 POP7O75817 140 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DIRAS1O95057 198 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUX4L2P0CJ85 424 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUX4L3P0CJ86 424 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUX4L4P0CJ87 422 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUX4L5P0CJ88 424 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUX4L6P0CJ89 424 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUX4L7P0CJ90 424 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF8P17098 575 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PRDX3P30048 256 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 GDI1P31150 447 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 GABARAPL2P60520 117 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 SEMA3BQ13214 749 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 RCAN2Q14206 197 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PTGR1Q14914 329 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PCBP2Q15366 365 aaKnown RBP eCLIP10.51□□□□□ -0.735e-7■■■■□ 25.7
PCDHGA1-202ENST00000517417 CNKSR3Q6P9H4 555 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 KDELC1Q6UW63 502 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 UBXN10Q96LJ8 280 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 SRMSQ9H3Y6 488 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 CARS2Q9HA77 564 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ABCB9Q9NP78 766 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 FNIP2Q9P278 1114 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUX4Q9UBX2 424 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 B4GALT6Q9UBX8 382 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF221Q9UK13 617 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PCDHGA8Q9Y5G5 932 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PCDHA9Q9Y5H5 950 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 LRRC72A6NJI9 287 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 TARM1B6A8C7 271 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 CASKO14936 926 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ADAMDEC1O15204 470 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF623O75123 536 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ATP1B2P14415 290 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 GGT1P19440 569 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 STK19P49842 368 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 GRIK2Q13002 908 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 IRF5Q13568 498 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 GANABQ14697 944 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PDGFRLQ15198 375 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF248Q8NDW4 579 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR13J1Q8NGT2 312 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms