RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 IARS2Q9NSE4 1012 aaKnown RBP8.18□□□□□ -1.1
PABPC1-202ENST00000517403 HCN3Q9P1Z3 774 aa8.18□□□□□ -1.1
PABPC1-202ENST00000517403 TRPC4Q9UBN4 977 aa8.18□□□□□ -1.1
PABPC1-202ENST00000517403 ZKSCAN5Q9Y2L8 839 aa8.18□□□□□ -1.1
PABPC1-202ENST00000517403 DHRS7Q9Y394 339 aa8.18□□□□□ -1.1
PABPC1-202ENST00000517403 CACNA1DQ01668 2161 aa8.18□□□□□ -1.1
PABPC1-202ENST00000517403 NCOA6Q14686 2063 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SGK494L7N484 410 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SRPX2O60687 465 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 PRAMEF4O60810 478 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 LILRA1O75019 489 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 PHF2O75151 1096 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 RDH16O75452 317 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 BMP10O95393 424 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 WDPCPO95876 746 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SYF2O95926 243 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 GAS8O95995 478 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 RPN2P04844 631 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 MPC1LP0DKB6 136 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CDH1P12830 882 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CMPK1P30085 196 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 RPA3P35244 121 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 OLR1P78380 273 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CDK16Q00536 496 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 ZNF169Q14929 603 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TCTE1Q5JU00 501 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 ZNF468Q5VIY5 522 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 PRAMEF9Q5VWM5 478 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 C1QL3Q5VWW1 255 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 FAM219BQ5XKK7 198 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 MRNIPQ6NTE8 343 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TMEM214Q6NUQ4 689 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CASC4Q6P4E1 433 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CCDC137Q6PK04 289 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 PAQR3Q6TCH7 311 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TMEM205Q6UW68 189 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 ZNF227Q86WZ6 799 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CHERPQ8IWX8 916 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TTC29Q8NA56 475 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 FBXO15Q8NCQ5 510 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 C2CD4AQ8NCU7 369 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 MCUQ8NE86 351 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TRIM58Q8NG06 486 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 KCNJ9Q92806 393 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SLC22A18Q96BI1 424 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 MIEF2Q96C03 454 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 PYCR2Q96C36 320 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TM4SF19Q96DZ7 209 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 MMABQ96EY8 250 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 IP6K3Q96PC2 410 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 OSBPL9Q96SU4 736 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SGPP1Q9BX95 441 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 TSSK1BQ9BXA7 367 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 LHPPQ9H008 270 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SMYD2Q9NRG4 433 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SEMA3GQ9NS98 782 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 C20orf96Q9NUD7 363 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 INTS10Q9NVR2 710 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 ZNF282Q9UDV7 671 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 ANAPC5Q9UJX4 755 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 OSGIN2Q9Y236 505 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CLDN16Q9Y5I7 305 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 COPG1Q9Y678 874 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 FAM169AQ9Y6X4 670 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 PRRC2CQ9Y520 2896 aaKnown RBP8.17□□□□□ -1.1
PABPC1-202ENST00000517403 CSMD2Q7Z408 3487 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SVILO95425 2214 aa8.17□□□□□ -1.1
PABPC1-202ENST00000517403 SERTM1A2A2V5 107 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 MAP2K7O14733 419 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 SEC24DO94855 1032 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 TBX6O95947 436 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 IL2RAP01589 272 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 C1QAP02745 245 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 MLNP12872 115 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 EZRP15311 586 aaKnown RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 CCNFP41002 786 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 TNFSF10P50591 281 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 RHAGQ02094 409 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 HYAL2Q12891 473 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 CDC16Q13042 620 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 ITPR2Q14571 2701 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 PPP1R3AQ16821 1122 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 MUM1Q2TAK8 710 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 CATSPEREQ5SY80 951 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 UBAP2Q5T6F2 1119 aaKnown RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 RNF187Q5TA31 235 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 YOD1Q5VVQ6 348 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 HIBCHQ6NVY1 386 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 NEK10Q6ZWH5 1172 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 UBE2R2Q712K3 238 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 MAMDC2Q7Z304 686 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-202ENST00000517403 FGD2Q7Z6J4 655 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 ALDH16A1Q8IZ83 802 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 KIF2BQ8N4N8 673 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 ZADH2Q8N4Q0 377 aa8.16□□□□□ -1.1
PABPC1-202ENST00000517403 ST6GALNAC3Q8NDV1 305 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms