RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 ARL15Q9NXU5 204 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GAR1Q9NY12 217 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 DPP3Q9NY33 737 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SMPD3Q9NY59 655 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MIS18AQ9NYP9 233 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TAS2R14Q9NYV8 317 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL20Q9NYY1 176 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GTSE1Q9NYZ3 720 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRHL1Q9NZI5 618 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 VSX1Q9NZR4 365 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 VPS54Q9P1Q0 977 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SEMA5BQ9P283 1151 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CTTNBP2NLQ9P2B4 639 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LARSQ9P2J5 1176 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ATXN10Q9UBB4 475 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 RHCGQ9UBD6 479 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NLKQ9UBE8 527 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 UPB1Q9UBR1 384 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GAGE2DQ9UEU5 116 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR14J1Q9UGF5 321 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 POLLQ9UGP5 575 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 DBNLQ9UJU6 430 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERTAD3Q9UJW9 196 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 AGO2Q9UKV8 859 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FZD4Q9ULV1 537 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FZD10Q9ULW2 581 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MYO6Q9UM54 1294 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLEC4AQ9UMR7 237 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 VPS4AQ9UN37 437 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNJ14Q9UNX9 436 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLA2G4CQ9UP65 541 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ERVK-11Q9UQG0 969 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ENTPD4Q9Y227 616 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCF19Q9Y242 345 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FOXA2Q9Y261 457 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NUDCQ9Y266 331 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNFSF13BQ9Y275 285 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 B3GNT3Q9Y2A9 372 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 EXOC6BQ9Y2D4 811 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 R3HDM2Q9Y2K5 976 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPS2Q9Y399 296 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NAALAD2Q9Y3Q0 740 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PKP3Q9Y446 797 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 HBS1LQ9Y450 684 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MFHAS1Q9Y4C4 1052 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LSM4Q9Y4Z0 139 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NME7Q9Y5B8 376 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PCDHGB1Q9Y5G3 927 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SRPRBQ9Y5M8 271 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 HEMK1Q9Y5R4 338 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GMEB1Q9Y692 573 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 AP4B1Q9Y6B7 739 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SIRT4Q9Y6E7 314 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CEPT1Q9Y6K0 416 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 COMMD3-BMI1R4GMX3 469 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF123Q5XPI4 1314 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 EMSYQ7Z589 1322 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 BRD4O60885 1362 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CARMIL1Q5VZK9 1371 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PARD3Q8TEW0 1356 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MST1RQ04912 1400 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIF27Q86VH2 1401 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZCCHC6Q5VYS8 1495 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRAV26-1A0A087WT03 109 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A087WUV0 522 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRAV24A0A0B4J272 114 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0G2JLW4 131 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0J9YYE9 177 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0U1RQF3 1178 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LOC100506127A0A0U1RQW1 187 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1B0GTQ1 180 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1B0GUL7 405 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PPW3 197 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCRBV7S3A2A0A539 114 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM129A0AVI4 362 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLSCR5A0PG75 271 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ERICH2A1L162 156 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAGEB16A2A368 324 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HEATR9A2RTY3 570 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TYW5A2RUC4 315 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C17orf102A2RUQ5 167 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM172BPA6NC97 362 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM8BA6NDV4 472 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANTXRLA6NF34 631 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKUB1A6NFN9 424 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM202A6NGA9 273 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM221A6NGB7 291 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TUBAL3A6NHL2 446 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKDD1BA6NHY2 528 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR52A4PA6NMU1 304 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKRD30BLA7E2S9 258 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C4orf47A7E2U8 309 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C17orf100A8MU93 164 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A8MUI8 341 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HEPACAM2A8MVW5 462 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCP11X1B4DZS4 312 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM150CB9EJG8 249 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPIPA3F8WFD2 350 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 H0YIZ8 118 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms