RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 SLC6A20Q9NP91 592 aa6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 MID1IP1Q9NPA3 183 aa6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 CUEDC1Q9NWM3 386 aaPredicted RBP6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 GEMIN8Q9NWZ8 242 aaKnown RBP6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 PSD3Q9NYI0 1048 aa6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 TMEM9Q9P0T7 183 aa6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 TRPS1Q9UHF7 1281 aa6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 SNX6Q9UNH7 406 aa6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 TSC22D4Q9Y3Q8 395 aa6.78□□□□□ -1.32
SCARNA6-201ENST00000515982 AKAP13Q12802 2813 aa6.77□□□□□ -1.32
SCARNA6-201ENST00000515982 CCDC187A0A096LP49 1063 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 SLCO1B7G3V0H7 640 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 H0YIV9 168 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 AZIN1O14977 448 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 OR1F1O43749 312 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ULK1O75385 1050 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CSO75390 466 aaKnown RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 OR4F21O95013 312 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CHEK2O96017 543 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 UROSP10746 265 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 TSPAN8P19075 237 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 VARSP26640 1264 aaKnown RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 HMOX2P30519 316 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 PIK3CBP42338 1070 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 SCTRP47872 440 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 SEPHS1P49903 392 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 HK2P52789 917 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ERVPABLB-1P60509 514 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 YBX1P67809 324 aaKnown RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 REEP5Q00765 189 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 MC2RQ01718 297 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 BST1Q10588 318 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 TRAF3Q13114 568 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 SLBPQ14493 270 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 IL11RAQ14626 422 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ZRSR2Q15696 482 aaKnown RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CPSF6Q16630 551 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 TLDC1Q6P9B6 456 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 RGS9BPQ6ZS82 235 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ZCCHC23Q6ZST2 131 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 RNF44Q7L0R7 432 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 RAB11FIP2Q7L804 512 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 TMPRSS9Q7Z410 1059 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 MTERF4Q7Z6M4 381 aaKnown RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 SYVN1Q86TM6 617 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CUZD1Q86UP6 607 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CRLF3Q8IUI8 442 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 LAS2Q8IYD9 372 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF655Q8N720 491 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 DCBLD1Q8N8Z6 715 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CAMKVQ8NCB2 501 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 TRPV3Q8NET8 790 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 AGAP11Q8TF27 550 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CCT6BQ92526 530 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 MOCOSQ96EN8 888 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 LIN37Q96GY3 246 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 PPM1MQ96MI6 270 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 FCRL4Q96PJ5 515 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 OR2A5Q96R48 311 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 CCT7Q99832 543 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 TMEM121BQ9BXQ6 578 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 KLHL25Q9H0H3 589 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 RHBGQ9H310 441 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ELOVL6Q9H5J4 265 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 FAM60AQ9NP50 221 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ACSS2Q9NR19 701 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 FBXO8Q9NRD0 319 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 NMRK1Q9NWW6 199 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 FAM53CQ9NYF3 392 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ZFP69BQ9UJL9 534 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 PILRAQ9UKJ1 303 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF490Q9ULM2 529 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 SH2B3Q9UQQ2 575 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 KLHL20Q9Y2M5 609 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 RNF11Q9Y3C5 154 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 RAP2CQ9Y3L5 183 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 TRAF6Q9Y4K3 522 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 AP1M2Q9Y6Q5 423 aa6.77□□□□□ -1.33
SCARNA6-201ENST00000515982 SNRNP200O75643 2136 aaKnown RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 IGSF10Q6WRI0 2623 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 A0A0J9YVX5 310 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 SERTM1A2A2V5 107 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 URADA6NGE7 173 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 SRRM3A6NNA2 597 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 EFCAB7A8K855 629 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 B4E171 279 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 H0YGG7 62 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 SLC28A1O00337 649 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 FOXE1O00358 373 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 PPP6CO00743 305 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 UBFD1O14562 309 aaKnown RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 HAT1O14929 419 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 POLR1CO15160 346 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 CASC3O15234 703 aaKnown RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 ZSCAN9O15535 394 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 LCMT2O60294 686 aaKnown RBP6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 PRAMEF4O60810 478 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 CTSVO60911 334 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 CLEC3AO75596 197 aa6.76□□□□□ -1.33
SCARNA6-201ENST00000515982 CAPN1P07384 714 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms