RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HEMK1Q9Y5R4 338 aaPredicted RBP12.16□□□□□ -0.46
CLCN3-210ENST00000515420 KCNE2Q9Y6J6 123 aa12.16□□□□□ -0.46
CLCN3-210ENST00000515420 PCSK5Q92824 1860 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 H0YIG0 161 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 AGPSO00116 658 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 PEX12O00623 359 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 FOXS1O43638 330 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 FAM155BO75949 473 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 NSA2O95478 260 aaKnown RBP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 CYC1P08574 325 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 LTA4HP09960 611 aaKnown RBP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 ZGLP1P0C6A0 271 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 OTX2P32243 289 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 AHRP35869 848 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 GGT5P36269 586 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 BCL6P41182 706 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 AVPR1BP47901 424 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 SLC6A12P48065 614 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 CSRP3P50461 194 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 SOX8P57073 446 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 PWP1Q13610 501 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 EFTUD2Q15029 972 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 DCAF10Q5QP82 559 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 CPZQ66K79 652 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 SULT1C3Q6IMI6 304 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 TMEM214Q6NUQ4 689 aaKnown RBP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 NIPAL1Q6NVV3 410 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 TBC1D1Q86TI0 1168 aaPredicted RBP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 ASPGQ86U10 573 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 GPSM1Q86YR5 675 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 AMER3Q8N944 861 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 CLEC1AQ8NC01 280 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 PDPRQ8NCN5 879 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 STT3BQ8TCJ2 826 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 SLC13A3Q8WWT9 602 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 IFT81Q8WYA0 676 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 NEIL2Q969S2 332 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 MIEF2Q96C03 454 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 PITHD1Q9GZP4 211 aaPredicted RBP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 NMRAL1Q9HBL8 299 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 MKKSQ9NPJ1 570 aaPredicted RBP12.15□□□□□ -0.46
CLCN3-210ENST00000515420 P4HTMQ9NXG6 502 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 GPRC5BQ9NZH0 403 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 TP53TG5Q9Y2B4 290 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 SLC22A7Q9Y694 548 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 MAU2Q9Y6X3 613 aa12.15□□□□□ -0.46
CLCN3-210ENST00000515420 A0A087X1B8 175 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 FEZF1A0PJY2 475 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 SUV39H1O43463 412 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 LCMT2O60294 686 aaKnown RBP12.14□□□□□ -0.47
CLCN3-210ENST00000515420 DNAJB5O75953 348 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 GNAZP19086 355 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 CXCR2P25025 360 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 GSTM2P28161 218 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 SKP1P63208 163 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 REEP5Q00765 189 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 KLC1Q07866 573 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 HERC3Q15034 1050 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 NXPE4Q6UWF7 544 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 RAPH1Q70E73 1250 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 PPP1R32Q7Z5V6 425 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 CMC1Q7Z7K0 106 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 IFT20Q8IY31 132 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 CNPY4Q8N129 248 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 DTWD1Q8N5C7 304 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 METTL27Q8N6F8 245 aaPredicted RBP12.14□□□□□ -0.47
CLCN3-210ENST00000515420 STAG3L4Q8TBR4 150 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 MMABQ96EY8 250 aaPredicted RBP12.14□□□□□ -0.47
CLCN3-210ENST00000515420 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 AIF1LQ9BQI0 150 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 SLC25A23Q9BV35 468 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 EHD1Q9H4M9 534 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 ZFP69BQ9UJL9 534 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 RNF112Q9ULX5 631 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 SLC22A14Q9Y267 594 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 ACOT9Q9Y305 439 aa12.14□□□□□ -0.47
CLCN3-210ENST00000515420 A0A1W2PQ72 361 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SOCS6O14544 535 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 OR1F1O43749 312 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 KERAO60938 352 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 WDR47O94967 919 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ACSL3O95573 720 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 S100BP04271 92 aaPredicted RBP12.13□□□□□ -0.47
CLCN3-210ENST00000515420 PLA2G2AP14555 144 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 CNTFP26441 200 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SCTRP47872 440 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SERPINB8P50452 374 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SERPINB9P50453 376 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 CCL11P51671 97 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 PGDP52209 483 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 RGS1Q08116 209 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 KLRB1Q12918 225 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 CDC16Q13042 620 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 CHAF1BQ13112 559 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 AIMP2Q13155 320 aaKnown RBP12.13□□□□□ -0.47
CLCN3-210ENST00000515420 COL9A2Q14055 689 aaPredicted RBP12.13□□□□□ -0.47
CLCN3-210ENST00000515420 OR4D1Q15615 310 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 FAM83EQ2M2I3 478 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 CATSPEREQ5SY80 951 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms