RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 OCRLQ01968 901 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 EIF3IQ13347 325 aaKnown RBP20.08■□□□□ 0.81
LSM6-207ENST00000515311 KCNAB1Q14722 419 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 ZRSR2Q15696 482 aaKnown RBP20.08■□□□□ 0.81
LSM6-207ENST00000515311 CPSF6Q16630 551 aaKnown RBP eCLIP20.08■□□□□ 0.81
LSM6-207ENST00000515311 CYB5D1Q6P9G0 228 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 ATG14Q6ZNE5 492 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 PLD3Q8IV08 490 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 MCATQ8IVS2 390 aaKnown RBP20.08■□□□□ 0.81
LSM6-207ENST00000515311 GALNT15Q8N3T1 639 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 CDYL2Q8N8U2 506 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 OR7G3Q8NG95 312 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 SORT1Q99523 831 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 CMKLR1Q99788 373 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 C20orf27Q9GZN8 174 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 ILKAPQ9H0C8 392 aaPredicted RBP20.08■□□□□ 0.81
LSM6-207ENST00000515311 RHBGQ9H310 441 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 CCDC134Q9H6E4 229 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 ENAMQ9NRM1 1142 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 ADGRE2Q9UHX3 823 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 ZFP69BQ9UJL9 534 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 SNX6Q9UNH7 406 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 RAP2CQ9Y3L5 183 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 AP1M2Q9Y6Q5 423 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 A0A0J9YVX5 310 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 LCMT2O60294 686 aaKnown RBP20.07■□□□□ 0.8
LSM6-207ENST00000515311 CRCPO75575 148 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 UROSP10746 265 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 FOLR1P15328 257 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 GUCY1A3Q02108 690 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 ACY1Q03154 408 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 CYP4F3Q08477 520 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 RBBP5Q15291 538 aaKnown RBP20.07■□□□□ 0.8
LSM6-207ENST00000515311 FRG2Q64ET8 278 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.07■□□□□ 0.8
LSM6-207ENST00000515311 ANKRD53Q8N9V6 530 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 OR8K5Q8NH50 307 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 METTL6Q8TCB7 284 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 RERGQ96A58 199 aaPredicted RBP20.07■□□□□ 0.8
LSM6-207ENST00000515311 ZNF285Q96NJ3 590 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 FRG2BQ96QU4 278 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 SHCBP1LQ9BZQ2 653 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 ZNF395Q9H8N7 513 aaPredicted RBP20.07■□□□□ 0.8
LSM6-207ENST00000515311 FANCEQ9HB96 536 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 TNFRSF12AQ9NP84 129 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 FGF21Q9NSA1 209 aa20.07■□□□□ 0.8
LSM6-207ENST00000515311 CCDC187A0A096LP49 1063 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 B4E171 279 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 AZIN1O14977 448 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 HCRTR1O43613 425 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 KRT6AP02538 564 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 KRT6BP04259 564 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 HMOX2P30519 316 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 TSPAN7P41732 249 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 PIK3CBP42338 1070 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 KRT6CP48668 564 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 ZNF33BQ06732 778 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 IFT88Q13099 833 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 TUBB3Q13509 450 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 GPR19Q15760 415 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 SH2D4BQ5SQS7 431 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 KANK2Q63ZY3 851 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 FRMPD2BQ6IN97 320 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 VN1R4Q7Z5H5 301 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 BPHLQ86WA6 291 aaPredicted RBP20.06■□□□□ 0.8
LSM6-207ENST00000515311 BMPERQ8N8U9 685 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 TRPV3Q8NET8 790 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 WDR20Q8TBZ3 569 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 N4BP2L2Q92802 583 aaPredicted RBP20.06■□□□□ 0.8
LSM6-207ENST00000515311 C7orf26Q96N11 449 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 FCRL4Q96PJ5 515 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 ELOVL6Q9H5J4 265 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 SYNPO2LQ9H987 977 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 TRAF6Q9Y4K3 522 aa20.06■□□□□ 0.8
LSM6-207ENST00000515311 KIF26BQ2KJY2 2108 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 ANKDD1BA6NHY2 528 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 H0YGG7 62 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 TXNDC9O14530 226 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 FFAR3O14843 346 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 GPR42O15529 346 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 CLEC3AO75596 197 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 FOXA1P55317 472 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 ARF3P61204 181 aaPredicted RBP20.05■□□□□ 0.8
LSM6-207ENST00000515311 PHEXP78562 749 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 MC2RQ01718 297 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 PWP1Q13610 501 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 IL11RAQ14626 422 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 DEFB110Q30KQ9 67 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 TCTE1Q5JU00 501 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 TTC19Q6DKK2 380 aaPredicted RBP20.05■□□□□ 0.8
LSM6-207ENST00000515311 RAB11FIP2Q7L804 512 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 TMPRSS7Q7RTY8 843 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 ASPGQ86U10 573 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 CLYBLQ8N0X4 340 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 ZNF655Q8N720 491 aaPredicted RBP20.05■□□□□ 0.8
LSM6-207ENST00000515311 ZNF781Q8N8C0 355 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 HUS1BQ8NHY5 278 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 ZNF501Q96CX3 271 aaPredicted RBP20.05■□□□□ 0.8
LSM6-207ENST00000515311 TM4SF19Q96DZ7 209 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 PRR11Q96HE9 360 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms