RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 GPAMQ9HCL2 828 aa23.26■■□□□ 1.31
SNF8-213ENST00000514929 MRPS2Q9Y399 296 aaKnown RBP23.26■■□□□ 1.31
SNF8-213ENST00000514929 IDSB3KWA1 339 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 CDC7O00311 574 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 HEXBP07686 556 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 CXCR2P25025 360 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 CCR8P51685 355 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 PPP1R3AQ16821 1122 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 SYT16Q17RD7 645 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 C3orf62Q6ZUJ4 267 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 ASPGQ86U10 573 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 CCDC25Q86WR0 208 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 CEP97Q8IW35 865 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 OR9A4Q8NGU2 314 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 PNPLA2Q96AD5 504 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 C8orf44Q96CB5 159 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 FAM129AQ9BZQ8 928 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 POPDC3Q9HBV1 291 aa23.25■■□□□ 1.31
SNF8-213ENST00000514929 TCRBV9S1A1TA0A576 114 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 CXorf49A8MYA2 514 aaPredicted RBP23.24■■□□□ 1.31
SNF8-213ENST00000514929 LCMT2O60294 686 aaKnown RBP23.24■■□□□ 1.31
SNF8-213ENST00000514929 MAT1AQ00266 395 aaKnown RBP23.24■■□□□ 1.31
SNF8-213ENST00000514929 CKAP4Q07065 602 aaKnown RBP23.24■■□□□ 1.31
SNF8-213ENST00000514929 ZNF572Q7Z3I7 529 aaPredicted RBP23.24■■□□□ 1.31
SNF8-213ENST00000514929 ABHD11Q8NFV4 315 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 SLC13A3Q8WWT9 602 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 TM4SF19Q96DZ7 209 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 OR4K3Q96R72 315 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 EGFL8Q99944 293 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 MESP1Q9BRJ9 268 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 MCMBPQ9BTE3 642 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 TGIF2Q9GZN2 237 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 CTNNAL1Q9UBT7 734 aa23.24■■□□□ 1.31
SNF8-213ENST00000514929 H0YIG0 161 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 NSA2O95478 260 aaKnown RBP23.23■■□□□ 1.31
SNF8-213ENST00000514929 HPP00738 406 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 GSTA2P09210 222 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 SLC35G6P0C7Q6 338 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 CD97P48960 835 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 POU4F1Q01851 419 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 MEF2AQ02078 507 aaPredicted RBP23.23■■□□□ 1.31
SNF8-213ENST00000514929 CSHL1Q14406 222 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 ATG9BQ674R7 924 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 FAAH2Q6GMR7 532 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 TMEM214Q6NUQ4 689 aaKnown RBP23.23■■□□□ 1.31
SNF8-213ENST00000514929 IGFL3Q6UXB1 125 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 FRA10AC1Q70Z53 315 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 ADAMTSL2Q86TH1 951 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 ZADH2Q8N4Q0 377 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 TBC1D19Q8N5T2 526 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 Q8NA96 180 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 MFSD9Q8NBP5 474 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 ZCCHC10Q8TBK6 192 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 FBXO25Q8TCJ0 367 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 ANKRD49Q8WVL7 239 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 SLC5A11Q8WWX8 675 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 TSPAN17Q96FV3 270 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 CPNE1Q99829 537 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 PHACTR1Q9C0D0 580 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 LHPPQ9H008 270 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 ZNF160Q9HCG1 818 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 MTO1Q9Y2Z2 717 aaKnown RBP23.23■■□□□ 1.31
SNF8-213ENST00000514929 DYRK1BQ9Y463 629 aa23.23■■□□□ 1.31
SNF8-213ENST00000514929 SPENQ96T58 3664 aaKnown RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 OR1F1O43749 312 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 VPS4BO75351 444 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 IL1RNP18510 177 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 SNRPNP63162 240 aaKnown RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 USP10Q14694 798 aaKnown RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 TSNQ15631 228 aaKnown RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 AGAP7PQ5VUJ5 663 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 CYS1Q717R9 158 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 PRSS41Q7RTY9 318 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 ZC3H7AQ8IWR0 971 aaKnown RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 CTAGE3PQ8IX95 158 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 KCT2Q8NC54 265 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 OR4K1Q8NGD4 311 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 NEIL2Q969S2 332 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 THOC3Q96J01 351 aaKnown RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 C16orf45Q96MC5 204 aaPredicted RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 TSNARE1Q96NA8 513 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 AGAP4Q96P64 663 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 CAB39LQ9H9S4 337 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 ZBTB20Q9HC78 741 aaPredicted RBP23.22■■□□□ 1.31
SNF8-213ENST00000514929 ANKHQ9HCJ1 492 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 MAP10Q9P2G4 905 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 MKL2Q9ULH7 1088 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 VPS4AQ9UN37 437 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 B3GNT3Q9Y2A9 372 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 OARD1Q9Y530 152 aa23.22■■□□□ 1.31
SNF8-213ENST00000514929 NSG1A0A0A6YYJ2 146 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 TRBC2A0A5B9 178 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 FAM159BA6NKW6 160 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 PCDH17O14917 1159 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 GP5P40197 560 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 GPX6P59796 221 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 CDKL1Q00532 357 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 EEF1A2Q05639 463 aaKnown RBP23.21■■□□□ 1.31
SNF8-213ENST00000514929 TRADDQ15628 312 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 INPP5JQ15735 1006 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms