RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TRBC2A0A5B9 178 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 TLDC2A0PJX2 215 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 FOXO6A8MYZ6 492 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 C9J4A7 227 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 GOLGA8RI6L899 631 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 H2AFYO75367 372 aaKnown RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 RAB40ALP0C0E4 278 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 C1GALT1C1LP0DN25 315 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 PRKAR1AP10644 381 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 GFAPP14136 432 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 ITGAXP20702 1163 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 VARSP26640 1264 aaKnown RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 PTPN4P29074 926 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 OR1D4P47884 311 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 NFKB2Q00653 900 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 RBBP5Q15291 538 aaKnown RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 MUM1Q2TAK8 710 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 SOWAHCQ53LP3 525 aaPredicted RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 C16orf46Q6P387 395 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 SLCO4C1Q6ZQN7 724 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 TDRPQ86YL5 185 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 CYP4X1Q8N118 509 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 TBC1D19Q8N5T2 526 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 METTL27Q8N6F8 245 aaPredicted RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 ENDOVQ8N8Q3 282 aaKnown RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 SLC13A3Q8WWT9 602 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 C10orf90Q96M02 699 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 AIF1LQ9BQI0 150 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 NLNQ9BYT8 704 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 ACTL8Q9H568 366 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 PPCSQ9HAB8 311 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 GPRC5BQ9NZH0 403 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 IFT80Q9P2H3 777 aaPredicted RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 GPN3Q9UHW5 284 aaPredicted RBP13.3□□□□□ -0.28
USP46-209ENST00000514536 MAU2Q9Y6X3 613 aa13.3□□□□□ -0.28
USP46-209ENST00000514536 CLGNO14967 610 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 KLK8O60259 260 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 CREG1O75629 220 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 PYGBP11216 843 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 EMP3P54852 163 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 REEP5Q00765 189 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 ERV3-1Q14264 604 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 SETDB1Q15047 1291 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 PDK4Q16654 411 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 FAM69BQ5VUD6 431 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 LRRC70Q7Z2Q7 622 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 ASPGQ86U10 573 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 CAMKVQ8NCB2 501 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 ACMSDQ8TDX5 336 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 UBTD2Q8WUN7 234 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 TM4SF19Q96DZ7 209 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 MRPL57Q9BQC6 102 aaKnown RBP13.29□□□□□ -0.28
USP46-209ENST00000514536 SARGQ9BW04 601 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 SLC22A11Q9NSA0 550 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 GEMIN8Q9NWZ8 242 aaKnown RBP13.29□□□□□ -0.28
USP46-209ENST00000514536 XPR1Q9UBH6 696 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 OPTCQ9UBM4 332 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
USP46-209ENST00000514536 LRRC14BA6NHZ5 514 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 K7EPI3 171 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 PRAMEF4O60810 478 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 SERPIND1P05546 499 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 TUBBP07437 444 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 NUDT17P0C025 328 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 PIM1P11309 404 aaPredicted RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 KRT15P19012 456 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 EPORP19235 508 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 SCTRP47872 440 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 ALDH18A1P54886 795 aaKnown RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 SNRPNP63162 240 aaKnown RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 MC1RQ01726 317 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 NCF4Q15080 339 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 NDUFA9Q16795 377 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 ATP1A1-AS1Q5TC04 95 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 GARNL3Q5VVW2 1013 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 PRAMEF9Q5VWM5 478 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 ATG9BQ674R7 924 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 CNPY4Q8N129 248 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 ARHGEF39Q8N4T4 335 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 TEX9Q8N6V9 391 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 KCT2Q8NC54 265 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 MOCOSQ96EN8 888 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 C17orf62Q9BQA9 187 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 MRPL46Q9H2W6 279 aaKnown RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 ZNF304Q9HCX3 659 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 TMEM216Q9P0N5 145 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 MRPS2Q9Y399 296 aaKnown RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 SEC16AO15027 2179 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 HEATR5BQ9P2D3 2071 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 TK2O00142 265 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 CDH16O75309 829 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 ONECUT2O95948 504 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 CXCR2P25025 360 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms