RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 AHRP35869 848 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SCTRP47872 440 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 CCR8P51685 355 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 EFNA3P52797 238 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SLC12A2P55011 1212 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 HYAL2Q12891 473 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 PWP1Q13610 501 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 C18orf21Q32NC0 220 aaPredicted RBP9.23□□□□□ -0.93
RNF4-221ENST00000513643 CATSPEREQ5SY80 951 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 THEMIS2Q5TEJ8 643 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 CPZQ66K79 652 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 ATG9BQ674R7 924 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SULT1C3Q6IMI6 304 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 NXPE4Q6UWF7 544 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SLCO4C1Q6ZQN7 724 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 MED25Q71SY5 747 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 CMC1Q7Z7K0 106 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SHISA5Q8N114 240 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 ANKRD53Q8N9V6 530 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 ZNF740Q8NDX6 193 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 RHEBL1Q8TAI7 183 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 NT5CQ8TCD5 201 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SLC5A11Q8WWX8 675 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 IFT81Q8WYA0 676 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 WDR34Q96EX3 536 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SMIM10Q96HG1 83 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 ING2Q9H160 280 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 EPB41L4BQ9H329 900 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 PELI2Q9HAT8 420 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 CTSFQ9UBX1 484 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 ZNF180Q9UJW8 692 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 NXT1Q9UKK6 140 aaKnown RBP9.23□□□□□ -0.93
RNF4-221ENST00000513643 CDC14AQ9UNH5 594 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 SLC22A14Q9Y267 594 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 MAN2B2Q9Y2E5 1009 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 PTRH2Q9Y3E5 179 aaKnown RBP9.23□□□□□ -0.93
RNF4-221ENST00000513643 SLC22A7Q9Y694 548 aa9.23□□□□□ -0.93
RNF4-221ENST00000513643 RP1L1Q8IWN7 2480 aaPredicted RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 FEZF1A0PJY2 475 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 RFPL1O75677 317 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 DNAJB5O75953 348 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 NSA2O95478 260 aaKnown RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 TBX6O95947 436 aaPredicted RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 ABHD2P08910 425 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 ZGLP1P0C6A0 271 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 GCAP28676 217 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 PHBP35232 272 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 FOLR3P41439 243 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 CASP2P42575 452 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 GDF5P43026 501 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 REEP5Q00765 189 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 TSTA3Q13630 321 aaPredicted RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 ATP1A4Q13733 1029 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 CSHL1Q14406 222 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 DCAF10Q5QP82 559 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 KIRREL2Q6UWL6 708 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 LAPTM4BQ86VI4 370 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 PDSS2Q86YH6 399 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 GPSM1Q86YR5 675 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 RAB43Q86YS6 212 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 IFT20Q8IY31 132 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 TCAIMQ8N3R3 496 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 CAMKVQ8NCB2 501 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 C9orf43Q8TAL5 461 aaPredicted RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 STAG3L4Q8TBR4 150 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 STT3BQ8TCJ2 826 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 CREB3L4Q8TEY5 395 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 DCAKDQ8WVC6 231 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 SLC13A3Q8WWT9 602 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 RERGQ96A58 199 aaPredicted RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 SEC16BQ96JE7 1060 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 UNKQ9C0B0 810 aaKnown RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 AICDAQ9GZX7 198 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 DRC3Q9H069 523 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 EHD1Q9H4M9 534 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 NT5DC2Q9H857 520 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 NMRAL1Q9HBL8 299 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 IRAK4Q9NWZ3 460 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 P4HTMQ9NXG6 502 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 GPRC5BQ9NZH0 403 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 ZNF282Q9UDV7 671 aaPredicted RBP9.22□□□□□ -0.93
RNF4-221ENST00000513643 NDOR1Q9UHB4 597 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 ZFP69BQ9UJL9 534 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 NFU1Q9UMS0 254 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 ACOT9Q9Y305 439 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 ASB1Q9Y576 335 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 HS3ST3B1Q9Y662 390 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 KCNE2Q9Y6J6 123 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 MAU2Q9Y6X3 613 aa9.22□□□□□ -0.93
RNF4-221ENST00000513643 A0A087X1B8 175 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 LOC102723996A0A087X1L8 192 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 A0A0A6YYC8 382 aaPredicted RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 ARGFXA6NJG6 315 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 I3L1I5 382 aaPredicted RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 AGPSO00116 658 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 MAP2K7O14733 419 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 KERAO60938 352 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 WFS1O76024 890 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms