RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107		B4E171	279 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	FFAR3	O14843	346 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	PLD2	O14939	933 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	GPR42	O15529	346 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	OR1F1	O43749	312 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	DNAJB6	O75190	326 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	ADRB1	P08588	477 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	ITGAX	P20702	1163 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	TSPAN7	P41732	249 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	ATP1A2	P50993	1020 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	NEK2	P51955	445 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	FOXM1	Q08050	763 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	TUBB3	Q13509	450 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	TBCC	Q15814	346 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	PRTG	Q2VWP7	1150 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	GRHL2	Q6ISB3	625 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	PWWP2B	Q6NUJ5	590 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	METTL2B	Q6P1Q9	378 aa	Known RBP	13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	GALNT15	Q8N3T1	639 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	PTCD3	Q96EY7	689 aa	Known RBP	13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	SORT1	Q99523	831 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	ZFYVE21	Q9BQ24	234 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	SPRY4	Q9C004	299 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	STRADB	Q9C0K7	418 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	ASCL3	Q9NQ33	180 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	SLC39A1	Q9NY26	324 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	PLCL2	Q9UPR0	1127 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	TIMM22	Q9Y584	194 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	ANGPTL3	Q9Y5C1	460 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	SDK2	Q58EX2	2172 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	KNTC1	P50748	2209 aa		13.9	□□□□□ -0.18
MATR3-238	ENST00000512107	TRABD2B	A6NFA1	517 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	BIRC5	O15392	142 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	SH3BGRL	O75368	114 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	TNFSF15	O95150	251 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	ETHE1	O95571	254 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	FGF5	P12034	268 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	EZR	P15311	586 aa	Known RBP	13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	NR1D1	P20393	614 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	SERPINB3	P29508	390 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	CCNG1	P51959	295 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	GABRE	P78334	506 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	BST1	Q10588	318 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	RBBP5	Q15291	538 aa	Known RBP	13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	ZRSR2	Q15696	482 aa	Known RBP	13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	2e-12	■■□□□ 14.4
MATR3-238	ENST00000512107	ST3GAL2	Q16842	350 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	ARL13A	Q5H913	290 aa	Predicted RBP	13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	WASHC2D	Q5SRD0	308 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	HHAT	Q5VTY9	493 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	LCN10	Q6JVE6	187 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	SCIMP	Q6UWF3	145 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	PRSS41	Q7RTY9	318 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	ZNF655	Q8N720	491 aa	Predicted RBP	13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	GOLGA6L1	Q8N7Z2	621 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	KCT2	Q8NC54	265 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	WDR36	Q8NI36	951 aa	Known RBP	13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	WDR20	Q8TBZ3	569 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	MTFMT	Q96DP5	389 aa	Known RBP	13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	C10orf90	Q96M02	699 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	ZNF382	Q96SR6	550 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	CMKLR1	Q99788	373 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	EHD1	Q9H4M9	534 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	ACTR8	Q9H981	624 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	MID1IP1	Q9NPA3	183 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	FBXO8	Q9NRD0	319 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	MID2	Q9UJV3	735 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	PTGDR2	Q9Y5Y4	395 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	WDFY3	Q8IZQ1	3526 aa		13.89	□□□□□ -0.19
MATR3-238	ENST00000512107	SCN3A	Q9NY46	2000 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	CFAP47	Q6ZTR5	3102 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	TMX2-CTNND1	H3BSU7	103 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	NPHS1	O60500	1241 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	EIF2S1	P05198	315 aa	Known RBP	13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	CAPN1	P07384	714 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	MSL3P1	P0C860	447 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	HRH2	P25021	359 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	HNRNPH1	P31943	449 aa	Known RBP	13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	ARL4D	P49703	201 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	RELA	Q04206	551 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	LCP2	Q13094	533 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	RCN2	Q14257	317 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	CLEC6A	Q6EIG7	209 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	GPRIN3	Q6ZVF9	776 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	TIPARP	Q7Z3E1	657 aa	Known RBP	13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	UBE3D	Q7Z6J8	389 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	MILR1	Q7Z6M3	343 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	CUZD1	Q86UP6	607 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	LAS2	Q8IYD9	372 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	CDYL2	Q8N8U2	506 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	AMER3	Q8N944	861 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	OR7G3	Q8NG95	312 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	PPP4R1	Q8TF05	950 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	ZNF473	Q8WTR7	871 aa	Known RBP	13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	CCDC126	Q96EE4	140 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	HBEGF	Q99075	208 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	AIF1L	Q9BQI0	150 aa		13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.88	□□□□□ -0.19
MATR3-238	ENST00000512107	DRC3	Q9H069	523 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms