RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.56□□□□□ -1.52
RNF4-217ENST00000511892 TCTE1Q5JU00 501 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 WASHC2DQ5SRD0 308 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 ZNF425Q6IV72 752 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 JMJD6Q6NYC1 403 aaPredicted RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 OVCH1Q7RTY7 1134 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 KCNMB4Q86W47 210 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 PAQR7Q86WK9 346 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 RAB43Q86YS6 212 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 CPNE9Q8IYJ1 553 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 METTL27Q8N6F8 245 aaPredicted RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 RBMXL3Q8N7X1 1067 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 Q8NA96 180 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.56□□□□□ -1.52
RNF4-217ENST00000511892 FBXO15Q8NCQ5 510 aaPredicted RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 C2CD4AQ8NCU7 369 aaPredicted RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 CD200R1Q8TD46 325 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 MAGEC3Q8TD91 643 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 ZNF480Q8WV37 535 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 DLG3Q92796 817 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 KCNJ9Q92806 393 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 INPP5DQ92835 1189 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 FKBP10Q96AY3 582 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 C10orf90Q96M02 699 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 PWWP2AQ96N64 755 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 GPR21Q99679 349 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 SMAD5Q99717 465 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 EBNA1BP2Q99848 306 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 C17orf62Q9BQA9 187 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 PLCD4Q9BRC7 762 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 MESP1Q9BRJ9 268 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 WDR83Q9BRX9 315 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 AARSD1Q9BTE6 412 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 DPH7Q9BTV6 452 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 ACAT2Q9BWD1 397 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 SLC26A1Q9H2B4 701 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 SAYSD1Q9NPB0 183 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 IARS2Q9NSE4 1012 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 P4HTMQ9NXG6 502 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 SLC17A6Q9P2U8 582 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 CTSFQ9UBX1 484 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 ZC3H7BQ9UGR2 993 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 ADAMTS6Q9UKP5 1117 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 FBXO5Q9UKT4 447 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 NOVA2Q9UNW9 492 aaKnown RBP5.56□□□□□ -1.52
RNF4-217ENST00000511892 DHRS7Q9Y394 339 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 MAD1L1Q9Y6D9 718 aa5.56□□□□□ -1.52
RNF4-217ENST00000511892 DOPEY1Q5JWR5 2465 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 CSMD1Q96PZ7 3565 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 UNC79Q9P2D8 2635 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 ALOX12BO75342 701 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 AHSGP02765 367 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 ALBP02768 609 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 EIF2S1P05198 315 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 CD63P08962 238 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 ENO3P13929 434 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 PGAM1P18669 254 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 MMP11P24347 488 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 IMPA1P29218 277 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 CMPK1P30085 196 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 RPA3P35244 121 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 SKIV2L2P42285 1042 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 PGGT1BP53609 377 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 SLC18A1P54219 525 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 RRADP55042 308 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 CDKN2DP55273 166 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 SOX8P57073 446 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 MAGOHP61326 146 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 SNRPNP63162 240 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 GNGT1P63211 74 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 PRDX1Q06830 199 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 PDIA2Q13087 525 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 PRTGQ2VWP7 1150 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 FAM214AQ32MH5 1076 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 PRR30Q53SZ7 412 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 DCAF10Q5QP82 559 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 HP1BP3Q5SSJ5 553 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 RBM20Q5T481 1227 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 YOD1Q5VVQ6 348 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 ICE2Q659A1 982 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 PAQR3Q6TCH7 311 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 KIRREL2Q6UWL6 708 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 SHISA6Q6ZSJ9 500 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 CYS1Q717R9 158 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 ZNF771Q7L3S4 317 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 PIWIL4Q7Z3Z4 852 aaKnown RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 CNTN4Q8IWV2 1026 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 LMNTD2Q8IXW0 634 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 GALNT16Q8N428 558 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 ARHGEF39Q8N4T4 335 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 RAB42Q8N4Z0 105 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 TTC29Q8NA56 475 aaPredicted RBP5.55□□□□□ -1.52
RNF4-217ENST00000511892 OR2W6PQ8NHA6 318 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 CPT1CQ8TCG5 803 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 CALML6Q8TD86 181 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 PYROXD1Q8WU10 500 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 EEF1AKMT1Q8WVE0 214 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 SMPDL3AQ92484 453 aa5.55□□□□□ -1.52
RNF4-217ENST00000511892 FER1L6-AS2Q96M78 137 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms