RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 FBXO48Q5FWF7 155 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CTAGE6Q86UF2 777 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 GALNT16Q8N428 558 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CLEC1AQ8NC01 280 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 KCT2Q8NC54 265 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 NOA1Q8NC60 698 aaKnown RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 FBF1Q8TES7 1133 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CDKL2Q92772 493 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 NEIL2Q969S2 332 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 MRRFQ96E11 262 aaKnown RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 FER1L6-AS2Q96M78 137 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 IP6K3Q96PC2 410 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CPNE1Q99829 537 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 EGFL8Q99944 293 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 PCBD2Q9H0N5 130 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 ZBTB20Q9HC78 741 aaPredicted RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 ZDHHC18Q9NUE0 388 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 CTNNAL1Q9UBT7 734 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 NXT1Q9UKK6 140 aaKnown RBP12.62□□□□□ -0.39
RNF4-215ENST00000511843 PLAAQ9Y263 795 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 ZNF451Q9Y4E5 1061 aa12.62□□□□□ -0.39
RNF4-215ENST00000511843 MYO18BQ8IUG5 2567 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 ZNF860A6NHJ4 632 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 OR1F1O43749 312 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 B3GALT4O96024 378 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 ANXA5P08758 320 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 CCDC166P0CW27 439 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 HRH2P25021 359 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 GP5P40197 560 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 SLC26A3P40879 764 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 GDF5P43026 501 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 CCR8P51685 355 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 EMP3P54852 163 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 POU4F1Q01851 419 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 EEF1A2Q05639 463 aaKnown RBP12.61□□□□□ -0.39
RNF4-215ENST00000511843 Q0VFX4 171 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 WHAMMP3Q1A5X7 153 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 TUBB8Q3ZCM7 444 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 PRR30Q53SZ7 412 aaPredicted RBP12.61□□□□□ -0.39
RNF4-215ENST00000511843 GARNL3Q5VVW2 1013 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 FRA10AC1Q70Z53 315 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 CMC1Q7Z7K0 106 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 ASPGQ86U10 573 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 THOC6Q86W42 341 aaKnown RBP12.61□□□□□ -0.39
RNF4-215ENST00000511843 ZC3H7AQ8IWR0 971 aaKnown RBP12.61□□□□□ -0.39
RNF4-215ENST00000511843 PARP9Q8IXQ6 854 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 RBMXL3Q8N7X1 1067 aaKnown RBP12.61□□□□□ -0.39
RNF4-215ENST00000511843 MFSD9Q8NBP5 474 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 OR11G2Q8NGC1 345 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 ATL1Q8WXF7 558 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 GPR22Q99680 433 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 HAUS8Q9BT25 410 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 HCN3Q9P1Z3 774 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 DMGDHQ9UI17 866 aaKnown RBP12.61□□□□□ -0.39
RNF4-215ENST00000511843 CDC14AQ9UNH5 594 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 NOVA2Q9UNW9 492 aaKnown RBP12.61□□□□□ -0.39
RNF4-215ENST00000511843 SLC22A14Q9Y267 594 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 OARD1Q9Y530 152 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 CPAMD8Q8IZJ3 1885 aa12.61□□□□□ -0.39
RNF4-215ENST00000511843 IGLV3-12A0A075B6K2 115 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 KCNE1BA0A087WTH5 132 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 OR2W5A6NFC9 320 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 IDSB3KWA1 339 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 SGK494L7N484 410 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 TXNDC9O14530 226 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 RDH16O75452 317 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 SERPIND1P05546 499 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 GSTA2P09210 222 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 STMN1P16949 149 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 ITGA3P26006 1051 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 VARSP26640 1264 aaKnown RBP12.6□□□□□ -0.39
RNF4-215ENST00000511843 CSRP3P50461 194 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 FOXK1P85037 733 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 KCNC4Q03721 635 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 CSHL1Q14406 222 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 MYBPC3Q14896 1274 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 SLMAPQ14BN4 828 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 OR4D1Q15615 310 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 VWA5B1Q5TIE3 1220 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 TMEM214Q6NUQ4 689 aaKnown RBP12.6□□□□□ -0.39
RNF4-215ENST00000511843 TMPRSS11BQ86T26 416 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 PDSS2Q86YH6 399 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 ABHD11Q8NFV4 315 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 SLC13A3Q8WWT9 602 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 SLC5A11Q8WWX8 675 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 EXT2Q93063 718 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 ESAMQ96AP7 390 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 TM4SF19Q96DZ7 209 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 MVB12AQ96EY5 273 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 SMAD5Q99717 465 aaKnown RBP12.6□□□□□ -0.39
RNF4-215ENST00000511843 RBCK1Q9BYM8 510 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 CLMPQ9H6B4 373 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 ZNF552Q9H707 407 aaPredicted RBP12.6□□□□□ -0.39
RNF4-215ENST00000511843 POPDC3Q9HBV1 291 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 ZNF160Q9HCG1 818 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 ATP13A2Q9NQ11 1180 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 SEMA3GQ9NS98 782 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 G3BP2Q9UN86 482 aaKnown RBP12.6□□□□□ -0.39
RNF4-215ENST00000511843 MAP4K5Q9Y4K4 846 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms