RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 RPS15AP62244 130 aaKnown RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 GUCY2DQ02846 1103 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 KLC1Q07866 573 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 AIMP2Q13155 320 aaKnown RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 TMEM214Q6NUQ4 689 aaKnown RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 JMJD6Q6NYC1 403 aaPredicted RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 ZDHHC24Q6UX98 284 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 MAATS1Q7Z4T9 603 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 STRA8Q7Z7C7 330 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 ANKMY2Q8IV38 441 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 KLHDC8AQ8IYD2 350 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 C17orf53Q8N3J3 647 aaPredicted RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 OR11G2Q8NGC1 345 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 BARD1Q99728 777 aaKnown RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 MESP1Q9BRJ9 268 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 FAM129AQ9BZQ8 928 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 TRIM31Q9BZY9 425 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 RHOJQ9H4E5 214 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 POPDC3Q9HBV1 291 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 IRAK4Q9NWZ3 460 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 ZNF282Q9UDV7 671 aaPredicted RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 CDC14AQ9UNH5 594 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 MRPS2Q9Y399 296 aaKnown RBP12.8□□□□□ -0.36
CLDND1-224ENST00000511667 MAP4K5Q9Y4K4 846 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 MAU2Q9Y6X3 613 aa12.8□□□□□ -0.36
CLDND1-224ENST00000511667 LOC102723996A0A087X1L8 192 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 FAM159BA6NKW6 160 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 H0YIG0 161 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 MASP2O00187 686 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 PEX12O00623 359 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 PCDH17O14917 1159 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
CLDND1-224ENST00000511667 DPM1O60762 260 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 SYF2O95926 243 aaKnown RBP12.79□□□□□ -0.36
CLDND1-224ENST00000511667 CYC1P08574 325 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 ATXN8OSP0DMR3 200 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 TAS2R39P59534 338 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 MRPS25P82663 173 aaKnown RBP12.79□□□□□ -0.36
CLDND1-224ENST00000511667 CDKL1Q00532 357 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 Q0VFX4 171 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
CLDND1-224ENST00000511667 NAE1Q13564 534 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 SLC6A19Q695T7 634 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 PLD3Q8IV08 490 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 CEP97Q8IW35 865 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 ZBED8Q8IZ13 594 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 AFAP1L2Q8N4X5 818 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 METTL27Q8N6F8 245 aaPredicted RBP12.79□□□□□ -0.36
CLDND1-224ENST00000511667 CLEC1AQ8NC01 280 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 ANKRD49Q8WVL7 239 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 PNPLA2Q96AD5 504 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 ATP13A2Q9NQ11 1180 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 NSMCE4AQ9NXX6 385 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 ZFATQ9P243 1243 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 FBXL4Q9UKA2 621 aa12.79□□□□□ -0.36
CLDND1-224ENST00000511667 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 CXorf49A8MYA2 514 aaPredicted RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 KLHL41O60662 606 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 NSA2O95478 260 aaKnown RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 LDLRP01130 860 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 EIF2S1P05198 315 aaKnown RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 GSTA2P09210 222 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 BCL6P41182 706 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 GPX6P59796 221 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 ZKSCAN8Q15776 578 aaPredicted RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 VWA2Q5GFL6 755 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 TMEM205Q6UW68 189 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 Q6ZS92 163 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 C17orf64Q86WR6 236 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 ZC3H7AQ8IWR0 971 aaKnown RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 PSMF1Q92530 271 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 CABS1Q96KC9 395 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 HAUS8Q9BT25 410 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 DRC3Q9H069 523 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 ATG10Q9H0Y0 220 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 SOX17Q9H6I2 414 aaPredicted RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 MKKSQ9NPJ1 570 aaPredicted RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 PPANQ9NQ55 473 aaKnown RBP12.78□□□□□ -0.36
CLDND1-224ENST00000511667 C14orf105Q9NVL8 296 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 SLC22A7Q9Y694 548 aa12.78□□□□□ -0.36
CLDND1-224ENST00000511667 ABCA2Q9BZC7 2435 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 FAM95CA0A1B0GW59 222 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 TCRBV9S1A1TA0A576 114 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 A6NL46 340 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 CDC7O00311 574 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 PRPF4O43172 522 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLDND1-224ENST00000511667 HNRNPRO43390 633 aaKnown RBP12.77□□□□□ -0.37
CLDND1-224ENST00000511667 HPP00738 406 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 COX6A1P12074 109 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 FBLP22087 321 aaKnown RBP12.77□□□□□ -0.37
CLDND1-224ENST00000511667 SSTR1P30872 391 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 CASQ1P31415 396 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 C2orf54Q08AI8 447 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 TRADDQ15628 312 aa12.77□□□□□ -0.37
CLDND1-224ENST00000511667 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
CLDND1-224ENST00000511667 CAPN13Q6MZZ7 669 aaPredicted RBP12.77□□□□□ -0.37
CLDND1-224ENST00000511667 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms