RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 LIMA1Q9UHB6 759 aaKnown RBP5.22□□□□□ -1.57
GYPB-212ENST00000511198 SLCO3A1Q9UIG8 710 aa5.22□□□□□ -1.57
GYPB-212ENST00000511198 GGA2Q9UJY4 613 aa5.22□□□□□ -1.57
GYPB-212ENST00000511198 AGO1Q9UL18 857 aaKnown RBP5.22□□□□□ -1.57
GYPB-212ENST00000511198 GPR34Q9UPC5 381 aa5.22□□□□□ -1.57
GYPB-212ENST00000511198 DTNAQ9Y4J8 743 aa5.22□□□□□ -1.57
GYPB-212ENST00000511198 NME7Q9Y5B8 376 aa5.22□□□□□ -1.57
GYPB-212ENST00000511198 SRPRBQ9Y5M8 271 aaKnown RBP5.22□□□□□ -1.57
GYPB-212ENST00000511198 VWFP04275 2813 aa5.22□□□□□ -1.57
GYPB-212ENST00000511198 NYNRINQ9P2P1 1898 aaKnown RBP5.22□□□□□ -1.57
GYPB-212ENST00000511198 TRGV8A0A0C4DH27 118 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 KIR2DS5A0A0G2JLQ3 304 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 TMEM272A0A1B0GTI8 110 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 FRMD3A2A2Y4 597 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 FAM90A8PA6NJQ4 464 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 CCDC169A6NNP5 214 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 KIR2DS3K7RE56 304 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 EIF3HO15372 352 aaKnown RBP eCLIP5.21□□□□□ -1.58
GYPB-212ENST00000511198 POLR2DO15514 142 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 CLDN3O15551 220 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 PRPF4O43172 522 aaKnown RBP eCLIP5.21□□□□□ -1.58
GYPB-212ENST00000511198 HUS1O60921 280 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 JRKO75564 520 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 DEXIO95424 95 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 SYF2O95926 243 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 IFNA2P01563 188 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 ATP5BP06576 529 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 RHOXF2BP0C7M4 288 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 FAM90A13PP0C7W8 464 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 FAM90A24PP0C7X0 464 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 IFNAR1P17181 557 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 IGFBP2P18065 325 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 POLR2EP19388 210 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 CD1CP29017 333 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 CHKAP35790 457 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 ATP5C1P36542 298 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 GSCP56915 257 aaPredicted RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 RAPSNQ13702 412 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 TMEM132DQ14C87 1099 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 P3H1Q32P28 736 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 EDRF1Q3B7T1 1238 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 ANXA2RQ3ZCQ2 193 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 GLE1Q53GS7 698 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 SEL1L3Q68CR1 1132 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 ZNF549Q6P9A3 640 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 Q6ZS92 163 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 NCCRP1Q6ZVX7 275 aaPredicted RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 B4GALNT4Q76KP1 1039 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 HORMAD1Q86X24 394 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 TMEM86AQ8N2M4 240 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 ACRBPQ8NEB7 543 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 ZFPM2Q8WW38 1151 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 THAP4Q8WY91 577 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 LMLNQ96KR4 655 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 LYZL4Q96KX0 146 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 TBATAQ96M53 351 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 SLX1AQ9BQ83 275 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 SYT15Q9BQS2 421 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 RHOXF2Q9BQY4 288 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 TSGA10Q9BZW7 698 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 KCNK9Q9NPC2 374 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 SAMSN1Q9NSI8 373 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 DECR2Q9NUI1 292 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 RBM28Q9NW13 759 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 ZNHIT6Q9NWK9 470 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 RMND1Q9NWS8 449 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 TMEM9Q9P0T7 183 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 ARMCX1Q9P291 453 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 RWDD2AQ9UIY3 292 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 INTS6Q9UL03 887 aaKnown RBP5.21□□□□□ -1.58
GYPB-212ENST00000511198 LRP12Q9Y561 859 aa5.21□□□□□ -1.58
GYPB-212ENST00000511198 TMCO5BA8MYB1 307 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 J3KTA2 159 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 CLDN5O00501 218 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 SMAD6O43541 496 aaKnown RBP5.2□□□□□ -1.58
GYPB-212ENST00000511198 KIAA0754O94854 1291 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 PAK4O96013 591 aaPredicted RBP5.2□□□□□ -1.58
GYPB-212ENST00000511198 ITGA5P08648 1049 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 XBP1P17861 261 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 EEF1GP26641 437 aaKnown RBP5.2□□□□□ -1.58
GYPB-212ENST00000511198 CASP14P31944 242 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 CA5AP35218 305 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 CYLC1P35663 651 aaPredicted RBP5.2□□□□□ -1.58
GYPB-212ENST00000511198 CA7P43166 264 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 LHX1P48742 406 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 ST8SIA6P61647 398 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 RPS18P62269 152 aaKnown RBP5.2□□□□□ -1.58
GYPB-212ENST00000511198 AKAP17AQ02040 695 aaKnown RBP5.2□□□□□ -1.58
GYPB-212ENST00000511198 TRA2AQ13595 282 aaKnown RBP eCLIP5.2□□□□□ -1.58
GYPB-212ENST00000511198 SOWAHAQ2M3V2 549 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 DEFB113Q30KQ7 82 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 ODF3L2Q3SX64 289 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 PIP5KL1Q5T9C9 394 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 NKAIN2Q5VXU1 208 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 LIPMQ5VYY2 423 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 ALS2CLQ60I27 953 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 NEK5Q6P3R8 708 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 EMBQ6PCB8 327 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 LVRNQ6Q4G3 990 aa5.2□□□□□ -1.58
GYPB-212ENST00000511198 IGFL3Q6UXB1 125 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms