RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 TLX3O43711 291 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 CPNE3O75131 537 aaKnown RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 H2AFYO75367 372 aaKnown RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ALDH3A1P30838 453 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 CCNG1P51959 295 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 PRKAA2P54646 552 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ERVPABLB-1P60509 514 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 UNC50Q53HI1 259 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 TTMPQ5BVD1 217 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 C1orf189Q5VU69 101 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 VN1R4Q7Z5H5 301 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ASPGQ86U10 573 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 DTWD1Q8N5C7 304 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 TBC1D19Q8N5T2 526 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 METTL27Q8N6F8 245 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 GOLGA6L1Q8N7Z2 621 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ANKRD53Q8N9V6 530 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 TTC29Q8NA56 475 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 MFSD9Q8NBP5 474 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 GALNT6Q8NCL4 622 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 OR4K1Q8NGD4 311 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 MGARPQ8TDB4 240 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 TRPC4APQ8TEL6 797 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 CCT6BQ92526 530 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ATP6V1E2Q96A05 226 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 TLCD1Q96CP7 247 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 CLIP3Q96DZ5 547 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 CCDC126Q96EE4 140 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 L3HYPDHQ96EM0 354 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 PTCD3Q96EY7 689 aaKnown RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 PKNOX2Q96KN3 472 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF578Q96N58 590 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ZPBPQ9BS86 351 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 NDC1Q9BTX1 674 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 EFCAB11Q9BUY7 163 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 CAPS2Q9BXY5 557 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 VIPAS39Q9H9C1 493 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ACTR5Q9H9F9 607 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 DHCR7Q9UBM7 475 aaKnown RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 NDOR1Q9UHB4 597 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 RUVBL1Q9Y265 456 aaKnown RBP9.94□□□□□ -0.82
NR1I3-227ENST00000510951 ACTL7BQ9Y614 415 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 CHD8Q9HCK8 2581 aa9.94□□□□□ -0.82
NR1I3-227ENST00000510951 FREM2Q5SZK8 3169 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 A0A1B0GTL3 188 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TMEM120BA0PK00 339 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 STMND1H3BQB6 276 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 PPP6CO00743 305 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 FFAR3O14843 346 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 GPR42O15529 346 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 NDUFS4O43181 175 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 RAD1O60671 282 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 SRPX2O60687 465 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 MED26O95402 600 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 DLGAP3O95886 979 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 PCNAP12004 261 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 IMPDH1P20839 514 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 HPDP32754 393 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 CCR10P46092 362 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 SCTRP47872 440 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 NAGLUP54802 743 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 PCBP4P57723 403 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 SNRPNP63162 240 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 CLCQ05315 142 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TRAF3Q13114 568 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 GPS2Q13227 327 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 DDX39BQ13838 428 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 MPP2Q14168 576 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 GRM7Q14831 915 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 SLC9A5Q14940 896 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TGIF1Q15583 401 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 PAGE2BQ5JRK9 111 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TCTE1Q5JU00 501 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 CFAP157Q5JU67 520 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 AGBL2Q5U5Z8 902 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 LIPMQ5VYY2 423 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 GRHL2Q6ISB3 625 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 METTL2BQ6P1Q9 378 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TLDC1Q6P9B6 456 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TMIGD1Q6UXZ0 262 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 ZCCHC23Q6ZST2 131 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TIPARPQ7Z3E1 657 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 BPHLQ86WA6 291 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 KRT78Q8N1N4 520 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 SLC38A9Q8NBW4 561 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 ZCCHC14Q8WYQ9 949 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 WDR34Q96EX3 536 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 ATP6V1G3Q96LB4 118 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 C10orf90Q96M02 699 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF285Q96NJ3 590 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 DCBLD2Q96PD2 775 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 PAIP2Q9BPZ3 127 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 C1QTNF3Q9BXJ4 246 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 EHD1Q9H4M9 534 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 GSTO2Q9H4Y5 243 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 SSU72Q9NP77 194 aaKnown RBP9.93□□□□□ -0.82
NR1I3-227ENST00000510951 CUTCQ9NTM9 273 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 TXLNGQ9NUQ3 528 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 OXSMQ9NWU1 459 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 MRPS2Q9Y399 296 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms