RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 PANK4Q9NVE7 773 aa4.41□□□□□ -1.7
GYPA-205ENST00000508337 TMEM181Q9P2C4 612 aa4.41□□□□□ -1.7
GYPA-205ENST00000508337 SLC12A6Q9UHW9 1150 aa4.41□□□□□ -1.7
GYPA-205ENST00000508337 LNPEPQ9UIQ6 1025 aa4.41□□□□□ -1.7
GYPA-205ENST00000508337 COLEC10Q9Y6Z7 277 aa4.41□□□□□ -1.7
GYPA-205ENST00000508337 SLC1A7O00341 560 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 RTCAO00442 366 aaKnown RBP4.4□□□□□ -1.71
GYPA-205ENST00000508337 DKC1O60832 514 aaKnown RBP eCLIP4.4□□□□□ -1.71
GYPA-205ENST00000508337 KRT33AO76009 404 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 HSPA4LO95757 839 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 VTNP04004 478 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 UGT1A4P22310 534 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 AADACP22760 399 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 TNNT3P45378 269 aaPredicted RBP4.4□□□□□ -1.71
GYPA-205ENST00000508337 TAF6P49848 677 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 RAD23AP54725 363 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 HSD17B7P56937 341 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 DCDC1P59894 354 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 CACNG1Q06432 222 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 RASGEF1BQ0VAM2 473 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 PTGISQ16647 500 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 TAF1BQ53T94 588 aaPredicted RBP4.4□□□□□ -1.71
GYPA-205ENST00000508337 HECTD3Q5T447 861 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 TTC27Q6P3X3 843 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 UNC5DQ6UXZ4 953 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 KIF6Q6ZMV9 814 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 CATSPER4Q7RTX7 472 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 SPATA21Q7Z572 469 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 DNAJB7Q7Z6W7 309 aaPredicted RBP4.4□□□□□ -1.71
GYPA-205ENST00000508337 PHLDB2Q86SQ0 1253 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 METTL4Q8N3J2 472 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 CARNMT1Q8N4J0 409 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 FAM89BQ8N5H3 189 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 TCEANCQ8N8B7 351 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 SEPT1Q8WYJ6 367 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 PIK3R3Q92569 461 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 CFAP53Q96M91 514 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 TDRD1Q9BXT4 1180 aaKnown RBP4.4□□□□□ -1.71
GYPA-205ENST00000508337 TSPY26PQ9H489 355 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 SNX7Q9UNH6 387 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 CCL27Q9Y4X3 112 aa4.4□□□□□ -1.71
GYPA-205ENST00000508337 TRBV4-1A0A0J9YWV2 114 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 TBX10O75333 385 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 ATP6AP2O75787 350 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 RECQL5O94762 991 aaPredicted RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 CYP2A7P20853 494 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 CDC25CP30307 473 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 HNF4AP41235 474 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 TMEM50BP56557 158 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 PKN2Q16513 984 aaKnown RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 HYAL4Q2M3T9 481 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 CTU2Q2VPK5 515 aaKnown RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 GPR33Q49SQ1 333 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 PARP10Q53GL7 1025 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 LACTB2Q53H82 288 aaPredicted RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 MOXD1Q6UVY6 613 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 LEKR1Q6ZMV7 388 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 VSIG1Q86XK7 387 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 CROCCP3Q8IVE0 287 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 CCAR2Q8N163 923 aaKnown RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 ANKRD13CQ8N6S4 541 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 GBP7Q8N8V2 638 aaPredicted RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 SETD6Q8TBK2 473 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 N4BP2L2Q92802 583 aaPredicted RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 TRIM44Q96DX7 344 aaPredicted RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 SPATA33Q96N06 139 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 JAKMIP1Q96N16 626 aaKnown RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 LRRC3BQ96PB8 259 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 DESI2Q9BSY9 194 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 KATNB1Q9BVA0 655 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 ANKRD2Q9GZV1 360 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 RIMS4Q9H426 269 aaPredicted RBP4.39□□□□□ -1.71
GYPA-205ENST00000508337 FZD8Q9H461 694 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 ACTL8Q9H568 366 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 GRPEL1Q9HAV7 217 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 DNAJC4Q9NNZ3 241 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 DCAF16Q9NXF7 216 aa4.39□□□□□ -1.71
GYPA-205ENST00000508337 TRBV5-5A0A0J9YX44 114 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 A0A1W2PPK0 400 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 E9PQ18 207 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 ZFAND5O76080 213 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 PGLSO95336 258 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 SLC4A1P02730 911 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 SERPING1P05155 500 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 GP1BBP13224 206 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 ATP6V1B1P15313 513 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 SLC8A3P57103 927 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 RAPSNQ13702 412 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 SLMAPQ14BN4 828 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 TAB1Q15750 504 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 EXT1Q16394 746 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 MOGAT2Q3SYC2 334 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 FUT10Q6P4F1 479 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 CYB5D1Q6P9G0 228 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 GALNTL5Q7Z4T8 443 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 SLFN11Q7Z7L1 901 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 DZIP1Q86YF9 867 aaKnown RBP4.38□□□□□ -1.71
GYPA-205ENST00000508337 RCOR2Q8IZ40 523 aa4.38□□□□□ -1.71
GYPA-205ENST00000508337 OR8H1Q8NGG4 311 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms