RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ZCCHC10Q8TBK6 192 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 FAM45AQ8TCE6 357 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 PPP4R1Q8TF05 950 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 LRRC39Q96DD0 335 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 KRT12Q99456 494 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 WDR77Q9BQA1 342 aaPredicted RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 SGPP1Q9BX95 441 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 MKKSQ9NPJ1 570 aaPredicted RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 C14orf105Q9NVL8 296 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 NOVA2Q9UNW9 492 aaKnown RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 VWA7Q9Y334 891 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 SNX24Q9Y343 169 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 PCDHGA10Q9Y5H3 936 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 SCN2AQ99250 2005 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 CPAMD8Q8IZJ3 1885 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 NAV2Q8IVL1 2488 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 EFCAB8A8MWE9 144 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 CCDC188H7C350 402 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 KLHL18O94889 574 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 AGFG2O95081 481 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 HEXBP07686 556 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 NPPBP16860 134 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 IL1RNP18510 177 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 GLRBP48167 497 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 MEF2AQ02078 507 aaPredicted RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 PDIA2Q13087 525 aaKnown RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 ZNF460Q14592 562 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 EIF2S3LQ2VIR3 472 aaKnown RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 LINC00696Q6ZRV3 163 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 C17orf64Q86WR6 236 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 KCT2Q8NC54 265 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 CNDP1Q96KN2 507 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 OR4K3Q96R72 315 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 SLC29A3Q9BZD2 475 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 TGIF2Q9GZN2 237 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 PCBD2Q9H0N5 130 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 ARL15Q9NXU5 204 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 MKL2Q9ULH7 1088 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 IGHV1-45A0A0A0MS14 117 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 NSG1A0A0A6YYJ2 146 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 PIAS1O75925 651 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 BMP10O95393 424 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 GUCA1CO95843 209 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 HIST1H2AGP0C0S8 130 aaPredicted RBP13.53□□□□□ -0.24
RAB28-205ENST00000508274 HIST1H2ADP20671 130 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 SAT1P21673 171 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 HRH2P25021 359 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 NDUFA9Q16795 377 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 FHL5Q5TD97 284 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
RAB28-205ENST00000508274 LCTLQ6UWM7 567 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 SBSNQ6UWP8 590 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 CAPN12Q6ZSI9 719 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 NDUFAF7Q7L592 441 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 SLC26A11Q86WA9 606 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 ZC3HC1Q86WB0 502 aaKnown RBP13.53□□□□□ -0.24
RAB28-205ENST00000508274 OR56A3Q8NH54 315 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 HIST1H2AHQ96KK5 128 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 PSMG3-AS1Q96PY0 264 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 HIST1H2AJQ99878 128 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 H2AFJQ9BTM1 129 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 SPNS1Q9H2V7 528 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 HCN3Q9P1Z3 774 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 ZFATQ9P243 1243 aa13.53□□□□□ -0.24
RAB28-205ENST00000508274 CORO1CQ9ULV4 474 aaPredicted RBP13.53□□□□□ -0.24
RAB28-205ENST00000508274 SVILO95425 2214 aa13.52□□□□□ -0.24
RAB28-205ENST00000508274 NBPF19A0A087WUL8 3843 aa13.52□□□□□ -0.24
RAB28-205ENST00000508274 OR2W5A6NFC9 320 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 E7ESA3 106 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 SGK494L7N484 410 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 NSA2O95478 260 aaKnown RBP13.52□□□□□ -0.25
RAB28-205ENST00000508274 PRR35P0CG20 571 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.25
RAB28-205ENST00000508274 CCND1P24385 295 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 CXCR2P25025 360 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 AVPR1BP47901 424 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 MGAT5Q09328 741 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 FRG1Q14331 258 aaKnown RBP13.52□□□□□ -0.25
RAB28-205ENST00000508274 CAPN13Q6MZZ7 669 aaPredicted RBP13.52□□□□□ -0.25
RAB28-205ENST00000508274 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 PDSS2Q86YH6 399 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 ZBED8Q8IZ13 594 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 SIRT6Q8N6T7 355 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 PRR7Q8TB68 274 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 DNAJB14Q8TBM8 379 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 BRIX1Q8TDN6 353 aaKnown RBP13.52□□□□□ -0.25
RAB28-205ENST00000508274 PSMF1Q92530 271 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 ANP32BQ92688 251 aaKnown RBP13.52□□□□□ -0.25
RAB28-205ENST00000508274 TM4SF19Q96DZ7 209 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 VN1R1Q9GZP7 353 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 MOCS1Q9NZB8 636 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 PTGFRNQ9P2B2 879 aa13.52□□□□□ -0.25
RAB28-205ENST00000508274 LOC102723996A0A087X1L8 192 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 FAM95CA0A1B0GW59 222 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 A0A1W2PQ72 361 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms