RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 EXD2Q9NVH0 621 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 FKBP14Q9NWM8 211 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLN6Q9NWW5 311 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 IMPAD1Q9NX62 359 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 MIOSQ9NXC5 875 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 THUMPD1Q9NXG2 353 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 KCTD5Q9NXV2 234 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 EHD3Q9NZN3 535 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SEC14L4Q9UDX3 406 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 POU2F3Q9UKI9 436 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PNMA8BQ9ULN7 279 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SATB2Q9UPW6 733 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PADI2Q9Y2J8 665 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CAB39Q9Y376 341 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDHGB6Q9Y5F9 930 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDHGB2Q9Y5G2 931 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDHGA3Q9Y5H0 932 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 RAI2Q9Y5P3 530 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 U3KQV3 271 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 A0A0U1RQF3 1178 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 LOC100506127A0A0U1RQW1 187 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 A0A1B0GVM2 712 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANKRD34BA5PLL1 514 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARRDC5A6NEK1 342 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HMX3A6NHT5 357 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MAGEB17A8MXT2 336 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 hCG_2039718K7EN88 272 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARVCFO00192 962 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 TNFRSF11BO00300 401 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCRL2O00421 344 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 FFAR3O14843 346 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 KPNA5O15131 536 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC16A5O15375 505 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 GPR42O15529 346 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 TAPBPO15533 448 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 EFSO43281 561 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR1I1O60431 355 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ACSL4O60488 711 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 UGDHO60701 494 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 AOC2O75106 756 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 TRIM3O75382 744 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 WBP4O75554 376 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PDE9AO76083 593 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 KCNK2O95069 426 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MFN2O95140 757 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 GUCA1CO95843 209 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 POMCP01189 267 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 YES1P07947 543 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ABCB1P08183 1280 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HIST1H2AGP0C0S8 130 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PIPP12273 146 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MYCLP1P12525 358 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HSD3B1P14060 373 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HOXB9P17482 250 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ENGP17813 658 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HIST1H2ADP20671 130 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 TCEA1P23193 301 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 GADD45AP24522 165 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HSD3B2P26439 372 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ADH6P28332 368 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PTPN6P29350 595 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HOXA9P31269 272 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HMGCLP35914 325 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 GGT5P36269 586 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 LIPAP38571 399 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RPL3P39023 403 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RGS6P49758 472 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SEPHS1P49903 392 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PNLIPRP1P54315 467 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RAB25P57735 213 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 GNG2P59768 71 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CREMQ03060 361 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SCN1BQ07699 218 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDH1Q08174 1060 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CACNB2Q08289 660 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RBBP4Q09028 425 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 IHHQ14623 411 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 IRF3Q14653 427 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDK10Q15131 360 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SF3B4Q15427 424 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SYT16Q17RD7 645 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 IFI44LQ53G44 452 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SGO1Q5FBB7 561 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CATSPEREQ5SY80 951 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF362Q5T0B9 420 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARMC4Q5T2S8 1044 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 C10orf62Q5T681 223 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 LDLRAD1Q5T700 205 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARMC12Q5T9G4 340 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MEDAGQ5VYS4 303 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 LRRC66Q68CR7 880 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SUSD1Q6UWL2 747 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 GLB1LQ6UWU2 654 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 TMC5Q6UXY8 1006 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF517Q6ZMY9 492 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MACC1Q6ZN28 852 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 USP50Q70EL3 339 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CEP68Q76N32 757 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms