RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
UBE2D3-221ENST00000507845 RARRES3Q9UL19 164 aa12.88□□□□□ -0.35
UBE2D3-221ENST00000507845 NEUROG3Q9Y4Z2 214 aa12.88□□□□□ -0.35
UBE2D3-221ENST00000507845 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
UBE2D3-221ENST00000507845 KCNE1BA0A087WTH5 132 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 WDR91A4D1P6 747 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 H0YGG7 62 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 POLR1CO15160 346 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 OR1F1O43749 312 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 UGDHO60701 494 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 CLDN9O95484 217 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 MLYCDO95822 493 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 OTCP00480 354 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 CXCR2P25025 360 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 HNF4AP41235 474 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 CCR10P46092 362 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 SCTRP47872 440 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 VSX2P58304 361 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 RAB15P59190 212 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ARF3P61204 181 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 PPP2R2AP63151 447 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 LCP2Q13094 533 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 LAPTM5Q13571 262 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 RTP5Q14D33 572 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 PAGE2BQ5JRK9 111 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 LIPJQ5W064 366 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 GRHL2Q6ISB3 625 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 CYB5D1Q6P9G0 228 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ZCCHC23Q6ZST2 131 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 VN1R4Q7Z5H5 301 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 BPHLQ86WA6 291 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 KRT78Q8N1N4 520 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ANKRD53Q8N9V6 530 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 OR8K5Q8NH50 307 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 MDM1Q8TC05 714 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 SREK1Q8WXA9 508 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 N4BP2L2Q92802 583 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ATP6V1E2Q96A05 226 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 THAP11Q96EK4 314 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 CDK15Q96Q40 435 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 TAAR9Q96RI9 348 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ZNF382Q96SR6 550 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 PAIP2Q9BPZ3 127 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 DDA1Q9BW61 102 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 PITHD1Q9GZP4 211 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 SPRTNQ9H040 489 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ENAMQ9NRM1 1142 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ZNF225Q9UK10 706 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 ZNF490Q9ULM2 529 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 RNF11Q9Y3C5 154 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 SCN3AQ9NY46 2000 aa12.87□□□□□ -0.35
UBE2D3-221ENST00000507845 TRABD2BA6NFA1 517 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 C9orf172C9J069 976 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 H3BQF6 201 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 UBFD1O14562 309 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 NPHS1O60500 1241 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 SRPX2O60687 465 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 TNFSF15O95150 251 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 AHRP35869 848 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 ARL1P40616 181 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 PKNOX1P55347 436 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 ITGA1P56199 1179 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 ERVPABLB-1P60509 514 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 RBBP5Q15291 538 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 GGTA1PQ4G0N0 100 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 HSP90B2PQ58FF3 399 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 DCAF12Q5T6F0 453 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 CES4AQ5XG92 561 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 LETMD1Q6P1Q0 360 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 IGF2-ASQ6U949 168 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 CEACAM20Q6UY09 585 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 GPRIN3Q6ZVF9 776 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 MILR1Q7Z6M3 343 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 SYVN1Q86TM6 617 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 PPP1R3BQ86XI6 285 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 MYLK4Q86YV6 388 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 OR4F6Q8NGB9 312 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 AGAP11Q8TF27 550 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 USP7Q93009 1102 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 RERGQ96A58 199 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 TM4SF19Q96DZ7 209 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 CNDP1Q96KN2 507 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 SERTAD3Q9UJW9 196 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 STK38LQ9Y2H1 464 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 MSRB2Q9Y3D2 182 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 PCDHGA3Q9Y5H0 932 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 B3GALT1Q9Y5Z6 326 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 AP1M2Q9Y6Q5 423 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 AHCTF1Q8WYP5 2266 aa12.86□□□□□ -0.35
UBE2D3-221ENST00000507845 FITM1A5D6W6 292 aa12.85□□□□□ -0.35
UBE2D3-221ENST00000507845 H0YIV9 168 aa12.85□□□□□ -0.35
UBE2D3-221ENST00000507845 P2RX6O15547 441 aa12.85□□□□□ -0.35
UBE2D3-221ENST00000507845 OR2B3O76000 313 aa12.85□□□□□ -0.35
UBE2D3-221ENST00000507845 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-221ENST00000507845 OR4F21O95013 312 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms