RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PCNAP12004 261 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 GRK3P35626 688 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 GABRA4P48169 554 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 NEK2P51955 445 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 E2F1Q01094 437 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 ZFP36L1Q07352 338 aaKnown RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 KCNAB1Q14722 419 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 HIST2H2ACQ16777 129 aaPredicted RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 FRG2Q64ET8 278 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 HIST2H2AA3Q6FI13 130 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 SCIMPQ6UWF3 145 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 ERMP1Q7Z2K6 904 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 DGLUCYQ7Z3D6 616 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 DNAJC22Q8N4W6 341 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 MFSD9Q8NBP5 474 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 PIWIL2Q8TC59 973 aaKnown RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 TWIST2Q8WVJ9 160 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 USP7Q93009 1102 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 MTFMTQ96DP5 389 aaKnown RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 TCTN2Q96GX1 697 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 FRG2BQ96QU4 278 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 HBEGFQ99075 208 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 ZFYVE21Q9BQ24 234 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 PITHD1Q9GZP4 211 aaPredicted RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 SOHLH2Q9NX45 425 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 PCDHGA4Q9Y5G9 962 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 PCDHGA11Q9Y5H2 935 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 KIF26BQ2KJY2 2108 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 LOC105369274A0A096LPK9 316 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 LOC102723532A0A0G2JNH3 316 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 ZNF195O14628 629 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 HGSO14964 777 aaPredicted RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 SHOX2O60902 331 aaPredicted RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 TBX6O95947 436 aaPredicted RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 PDYNP01213 254 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 KRT6AP02538 564 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 STATHP02808 62 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 KRT6BP04259 564 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 CTSBP07858 339 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 FTH1P19P0C7X4 201 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 NELFEP18615 380 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 KRT6CP48668 564 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 RPS15AP62244 130 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 CYP4F2P78329 520 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 RELAQ04206 551 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 BTKQ06187 659 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 DDX39BQ13838 428 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 ABRAXAS2Q15018 415 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 PDCD2Q16342 344 aaPredicted RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 SGO1Q5FBB7 561 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 PHF19Q5T6S3 580 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 CDCP2Q5VXM1 449 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 FRMPD2BQ6IN97 320 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 DHRS13Q6UX07 377 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 RBM44Q6ZP01 1051 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 MAVSQ7Z434 540 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 VN1R4Q7Z5H5 301 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 KMT5CQ86Y97 462 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 WDR75Q8IWA0 830 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 OR4N4Q8N0Y3 316 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 D2HGDHQ8N465 521 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 HUS1BQ8NHY5 278 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 ZNF473Q8WTR7 871 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 SELENOMQ8WWX9 145 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 UBE2E3Q969T4 207 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 THOC1Q96FV9 657 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 OR2A5Q96R48 311 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 MTERF1Q99551 399 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 CHRNA10Q9GZZ6 450 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 RHBGQ9H310 441 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 PDE7BQ9NP56 450 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 CDV3Q9UKY7 258 aaKnown RBP13.57□□□□□ -0.24
RNF4-208ENST00000507247 SNX6Q9UNH7 406 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 TSC22D4Q9Y3Q8 395 aa13.57□□□□□ -0.24
RNF4-208ENST00000507247 MAGEB17A8MXT2 336 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 H0YGG7 62 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 AGRPO00253 132 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 PIP5K1BO14986 540 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 P2RX6O15547 441 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 CEACAM1P13688 526 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 FOLR1P15328 257 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 AHRP35869 848 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
RNF4-208ENST00000507247 INHBCP55103 352 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 ARF3P61204 181 aaPredicted RBP13.56□□□□□ -0.24
RNF4-208ENST00000507247 HSD11B2P80365 405 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 SIM1P81133 766 aaPredicted RBP13.56□□□□□ -0.24
RNF4-208ENST00000507247 IFT88Q13099 833 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 PUM1Q14671 1186 aaKnown RBP eCLIP13.56□□□□□ -0.24
RNF4-208ENST00000507247 C16orf72Q14CZ0 275 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 KIRREL3Q8IZU9 778 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 CREB3L4Q8TEY5 395 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 REPS1Q96D71 796 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 PPP1R36Q96LQ0 422 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 C3orf30Q96M34 536 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 MACROD1Q9BQ69 325 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 AICDAQ9GZX7 198 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms