RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PRTGQ2VWP7 1150 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 SIRPB2Q5JXA9 342 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 LIPNQ5VXI9 398 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 SEM1Q6ZVN7 128 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 PLEKHM3Q6ZWE6 761 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 TAS2R42Q7RTR8 314 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 MAATS1Q7Z4T9 603 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 SLC22A16Q86VW1 577 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 CYP4Z2PQ8N1L4 340 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 CLDN19Q8N6F1 224 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 CSNK1A1LQ8N752 337 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 OR4K2Q8NGD2 314 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 ULK4Q96C45 1275 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 MVB12AQ96EY5 273 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 PIK3IP1Q96FE7 263 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 ADAM19Q9H013 955 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 DRC3Q9H069 523 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 TIMMDC1Q9NPL8 285 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 DEPPQ9NTK1 212 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 HACD3Q9P035 362 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 KCMF1Q9P0J7 381 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 MYO1AQ9UBC5 1043 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 ZNF629Q9UEG4 869 aaPredicted RBP6.72□□□□□ -1.33
VCAN-207ENST00000507162 RWDD2AQ9UIY3 292 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 SLC39A10Q9ULF5 831 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 ERVK-11Q9UQG0 969 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 ZNF281Q9Y2X9 895 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 ARL5AQ9Y689 179 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 FREM1Q5H8C1 2179 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 ALPK2Q86TB3 2170 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 A0A1B0GVC2 190 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 SERINC4A6NH21 518 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ARHGEF33A8MVX0 844 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 LIN7AO14910 233 aaPredicted RBP6.71□□□□□ -1.34
VCAN-207ENST00000507162 TUBB4AP04350 444 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 CELA3AP09093 270 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 PSMB5P28074 263 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 GJC1P36383 396 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 MAGEA5P43359 124 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 AVPR1BP47901 424 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 CDKN1CP49918 316 aaPredicted RBP6.71□□□□□ -1.34
VCAN-207ENST00000507162 SLC26A5P58743 744 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 IFI35P80217 286 aaPredicted RBP6.71□□□□□ -1.34
VCAN-207ENST00000507162 TRIM14Q14142 442 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ABRAXAS2Q15018 415 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 SIX1Q15475 284 aaPredicted RBP6.71□□□□□ -1.34
VCAN-207ENST00000507162 HYAL4Q2M3T9 481 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ZNF658BQ4V348 819 aaPredicted RBP6.71□□□□□ -1.34
VCAN-207ENST00000507162 C20orf204Q6ZNR8 217 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 RGS9BPQ6ZS82 235 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 KCTD6Q8NC69 237 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 OR2M7Q8NG81 312 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 OR9A4Q8NGU2 314 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 SGMS2Q8NHU3 365 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ELP5Q8TE02 316 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 HEXDCQ8WVB3 486 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 TMEM171Q8WVE6 324 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ELMO1Q92556 727 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ZDHHC16Q969W1 377 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ISL2Q96A47 359 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 TADA1Q96BN2 335 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ZNF830Q96NB3 372 aaPredicted RBP6.71□□□□□ -1.34
VCAN-207ENST00000507162 RBM24Q9BX46 236 aaKnown RBP6.71□□□□□ -1.34
VCAN-207ENST00000507162 DEFB126Q9BYW3 111 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 TTTY12Q9BZ98 90 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 SHARPINQ9H0F6 387 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 GANQ9H2C0 597 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 ZDHHC11Q9H8X9 412 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 GLOD4Q9HC38 313 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 HCN3Q9P1Z3 774 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 NDRG3Q9UGV2 375 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 FAM153AQ9UHL3 310 aa6.71□□□□□ -1.34
VCAN-207ENST00000507162 KIAA1549Q9HCM3 1950 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 TRGV5A0A0B4J1U4 118 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 LOC285095A0A1B0GVY8 99 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 C2orf81A6NN90 581 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 A8MUA0 341 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 SUSD5O60279 629 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 CDC123O75794 336 aaPredicted RBP6.7□□□□□ -1.34
VCAN-207ENST00000507162 SOX30O94993 753 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 IGHG3P01860 377 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 ITGALP20701 1170 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 CEACAM8P31997 349 aaPredicted RBP6.7□□□□□ -1.34
VCAN-207ENST00000507162 XCR1P46094 333 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 CPA2P48052 419 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 ZNF136P52737 540 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 JAM2P57087 298 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 OCRLQ01968 901 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 PPIDQ08752 370 aaKnown RBP6.7□□□□□ -1.34
VCAN-207ENST00000507162 PTK6Q13882 451 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 SYTL3Q4VX76 610 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 POMZP3Q6PJE2 187 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 ABHD13Q7L211 337 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 LUZP2Q86TE4 346 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 TMEM251Q8N6I4 163 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 OR2L8Q8NGY9 312 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 OR51Q1Q8NH59 317 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 RERGQ96A58 199 aaPredicted RBP6.7□□□□□ -1.34
VCAN-207ENST00000507162 TIGD1Q96MW7 591 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms