RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ACSL6Q9UKU0 697 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 ZNF490Q9ULM2 529 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-210ENST00000506767 PCDHB3Q9Y5E6 796 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 A0A1B0GTL3 188 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 TMEM120BA0PK00 339 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 HMGB1P1B2RPK0 211 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 OR1F1O43749 312 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 OR2B3O76000 313 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 CAPNS1P04632 268 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 SLC5A2P31639 672 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 AHRP35869 848 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 HNF4AP41235 474 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 SERPINB4P48594 390 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 VSX2P58304 361 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 ERVPABLB-1P60509 514 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 CYP4F3Q08477 520 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 TRAF3Q13114 568 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 SLBPQ14493 270 aaKnown RBP eCLIP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 PRTGQ2VWP7 1150 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 GGTA1PQ4G0N0 100 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 WASHC2DQ5SRD0 308 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 GRHL2Q6ISB3 625 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 TLDC1Q6P9B6 456 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 TMIGD1Q6UXZ0 262 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 LAS2Q8IYD9 372 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 KRT78Q8N1N4 520 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 ARHGEF39Q8N4T4 335 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 ANKRD53Q8N9V6 530 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 TRPC4APQ8TEL6 797 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 N4BP2L2Q92802 583 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF578Q96N58 590 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 MECRQ9BV79 373 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 GATA5Q9BWX5 397 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 SEMA4BQ9NPR2 832 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 DKK4Q9UBT3 224 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 ZFP69BQ9UJL9 534 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF225Q9UK10 706 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 TSC22D4Q9Y3Q8 395 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 TMEM184BQ9Y519 407 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-210ENST00000506767 AK5Q9Y6K8 562 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 AP1M2Q9Y6Q5 423 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 EPG5Q9HCE0 2579 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 WDFY3Q8IZQ1 3526 aa12.27□□□□□ -0.45
TCOF1-210ENST00000506767 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-210ENST00000506767 H0YIV9 168 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 DYNC1I1O14576 645 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 BIRC5O15392 142 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 ZSCAN9O15535 394 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-210ENST00000506767 P2RX6O15547 441 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 SCRG1O75711 98 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 CLDN9O95484 217 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 MLYCDO95822 493 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 DLGAP3O95886 979 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 OTCP00480 354 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF28P17035 718 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 TSPAN8P19075 237 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 GSTM2P28161 218 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 CCNG1P51959 295 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 EMP3P54852 163 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 WDR4P57081 412 aaKnown RBP12.26□□□□□ -0.45
TCOF1-210ENST00000506767 ASPHQ12797 758 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 RBBP5Q15291 538 aaKnown RBP12.26□□□□□ -0.45
TCOF1-210ENST00000506767 PAGE2BQ5JRK9 111 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 MANEAQ5SRI9 462 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 PRAMEF17Q5VTA0 474 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 FRMD7Q6ZUT3 714 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 VN1R5Q7Z5H4 357 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 GPR135Q8IZ08 494 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 TBC1D19Q8N5T2 526 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 CCNYL1Q8N7R7 359 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 SLC38A9Q8NBW4 561 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 OR4F6Q8NGB9 312 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 CREB3L4Q8TEY5 395 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 PPP4R1Q8TF05 950 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 ATP6V1E2Q96A05 226 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 RERGQ96A58 199 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-210ENST00000506767 SEC16BQ96JE7 1060 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 LRFN5Q96NI6 719 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 CDK15Q96Q40 435 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF382Q96SR6 550 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 RHBGQ9H310 441 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 ACTR8Q9H981 624 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 THSD1Q9NS62 852 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 STARD5Q9NSY2 213 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 RNF11Q9Y3C5 154 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 CHD8Q9HCK8 2581 aa12.26□□□□□ -0.45
TCOF1-210ENST00000506767 C1QTNF9BB2RNN3 333 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 TXNDC9O14530 226 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 UBFD1O14562 309 aaKnown RBP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF749O43361 778 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 NPHS1O60500 1241 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 KIAA0754O94854 1291 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 TBX6O95947 436 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 C1QTNF9P0C862 333 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 CD82P27701 267 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 HYAL2Q12891 473 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 LCP2Q13094 533 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 PWP1Q13610 501 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 GRM7Q14831 915 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms