RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ARPC2O15144 300 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 RPS6KA5O75582 802 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 SLC22A3O75751 556 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 IGLV2-11P01706 119 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 PRSS1P07477 247 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 EFNA1P20827 205 aaPredicted RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 MUTP22033 750 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 CTNNA1P35221 906 aaKnown RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 WNT5AP41221 380 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 MTCP1P56278 107 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 LINC01547P58512 204 aaPredicted RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 TAF13Q15543 124 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 UGCGQ16739 394 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 CTU2Q2VPK5 515 aaKnown RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 RBMS3Q6XE24 437 aaKnown RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 TRMT1LQ7Z2T5 733 aaKnown RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 KLHL7Q8IXQ5 586 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 C9orf43Q8TAL5 461 aaPredicted RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 NODALQ96S42 347 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 CCDC3Q9BQI4 270 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 DESI2Q9BSY9 194 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 ALDH8A1Q9H2A2 487 aaPredicted RBP5.4□□□□□ -1.54
HERC4-213ENST00000506515 Q9H8V8 135 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 FGF21Q9NSA1 209 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 NARFQ9UHQ1 456 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 STUB1Q9UNE7 303 aa5.4□□□□□ -1.54
HERC4-213ENST00000506515 SBF1O95248 1867 aa5.4□□□□□ -1.55
HERC4-213ENST00000506515 TONSLQ96HA7 1378 aa5.4□□□□□ -1.55
HERC4-213ENST00000506515 PDE4DIPQ5VU43 2346 aa5.4□□□□□ -1.55
HERC4-213ENST00000506515 DOT1LQ8TEK3 1739 aa5.4□□□□□ -1.55
HERC4-213ENST00000506515 CASTOR2A6NHX0 329 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 IFITM10A6NMD0 228 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 SLC22A2O15244 555 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 ATP6AP2O75787 350 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 LUC7L3O95232 432 aaKnown RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 SIX3O95343 332 aaPredicted RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 SERPINB2P05120 415 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 CD27P26842 260 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 ALDH1B1P30837 517 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 CEACAM8P31997 349 aaPredicted RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 RPL21P46778 160 aaKnown RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 RGS7P49802 495 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 PTENP60484 403 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 ITPK1Q13572 414 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 RRS1Q15050 365 aaKnown RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 NONOQ15233 471 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERC4-213ENST00000506515 PHKG1Q16816 387 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 TMEM182Q6ZP80 229 aaPredicted RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 C18orf65Q6ZTR6 163 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 TRPT1Q86TN4 253 aaKnown RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 DZIP1Q86YF9 867 aaKnown RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 TIGD4Q8IY51 512 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 RASGEF1AQ8N9B8 481 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 GRAPLQ8TC17 118 aaPredicted RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 CORO2AQ92828 525 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 ERO1AQ96HE7 468 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 SENP5Q96HI0 755 aaPredicted RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 PANK2Q9BZ23 570 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 GSN-AS1Q9NRJ2 163 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 FAM207AQ9NSI2 230 aaPredicted RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 ADPRHL2Q9NX46 363 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 USP54Q70EL1 1684 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 USP42Q9H9J4 1324 aaKnown RBP5.39□□□□□ -1.55
HERC4-213ENST00000506515 MON2Q7Z3U7 1717 aa5.39□□□□□ -1.55
HERC4-213ENST00000506515 N4BP2Q86UW6 1770 aaPredicted RBP5.38□□□□□ -1.55
HERC4-213ENST00000506515 ATP6V0E1O15342 81 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 SLC7A4O43246 635 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 SNX3O60493 162 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 FRMD6-AS1P0C7T7 363 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 LBPP18428 481 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 KLC1Q07866 573 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 RASGEF1BQ0VAM2 473 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 ILF2Q12905 390 aaKnown RBP5.38□□□□□ -1.55
HERC4-213ENST00000506515 TNK1Q13470 666 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 PTGISQ16647 500 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 XKR3Q5GH77 459 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 NHSL2Q5HYW2 709 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 NRARPQ7Z6K4 114 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 OR52N5Q8NH56 324 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 RAD54LQ92698 747 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 TLE6Q9H808 572 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 TRPV4Q9HBA0 871 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 P4HTMQ9NXG6 502 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 DDX43Q9NXZ2 648 aaKnown RBP5.38□□□□□ -1.55
HERC4-213ENST00000506515 WWOXQ9NZC7 414 aa5.38□□□□□ -1.55
HERC4-213ENST00000506515 KDM6AO15550 1401 aaPredicted RBP5.38□□□□□ -1.55
HERC4-213ENST00000506515 ITGB4P16144 1822 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 SCN4AP35499 1836 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 TRAV24A0A0B4J272 114 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 EME2A4GXA9 379 aaPredicted RBP5.37□□□□□ -1.55
HERC4-213ENST00000506515 C2orf81A6NN90 581 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 PRSS44E7EML9 344 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 H0YAE9 185 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 ZNF197O14709 1029 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 DDHD2O94830 711 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 ZNF432O94892 652 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 PGLSO95336 258 aa5.37□□□□□ -1.55
HERC4-213ENST00000506515 NGFP01138 241 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms