RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 ST6GAL1P15907 406 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 VARSP26640 1264 aaKnown RBP12.8□□□□□ -0.36
RCN1-202ENST00000506388 CCKBRP32239 447 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 ARFIP1P53367 373 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 INHBCP55103 352 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 HSD11B2P80365 405 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 SLBPQ14493 270 aaKnown RBP eCLIP12.8□□□□□ -0.36
RCN1-202ENST00000506388 ZC3H12BQ5HYM0 836 aaKnown RBP12.8□□□□□ -0.36
RCN1-202ENST00000506388 SH2D4BQ5SQS7 431 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 CDCP2Q5VXM1 449 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 FBXO42Q6P3S6 717 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 USP53Q70EK8 1073 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 TRIM46Q7Z4K8 759 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 DNAJC22Q8N4W6 341 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 METTL2AQ96IZ6 378 aaKnown RBP12.8□□□□□ -0.36
RCN1-202ENST00000506388 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 OR2A5Q96R48 311 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 TNFRSF12AQ9NP84 129 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 ZFP69BQ9UJL9 534 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 PCDHGA4Q9Y5G9 962 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 DNAJC15Q9Y5T4 150 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 AP1M2Q9Y6Q5 423 aa12.8□□□□□ -0.36
RCN1-202ENST00000506388 IGHV5-51A0A0C4DH38 117 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 IGHV5-10-1A0A0J9YXX1 117 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 HDAC3O15379 428 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 MAP3K7O43318 606 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 ULK1O75385 1050 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 CHEK2O96017 543 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 NELFEP18615 380 aaKnown RBP12.79□□□□□ -0.36
RCN1-202ENST00000506388 GABRA4P48169 554 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 FOXA1P55317 472 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 ZRSR2Q15696 482 aaKnown RBP12.79□□□□□ -0.36
RCN1-202ENST00000506388 ZIC1Q15915 447 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 CPSF6Q16630 551 aaKnown RBP eCLIP12.79□□□□□ -0.36
RCN1-202ENST00000506388 CACHD1Q5VU97 1274 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 FAM92BQ6ZTR7 304 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 TMPRSS9Q7Z410 1059 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 TRIM73Q86UV7 250 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 WDR75Q8IWA0 830 aaKnown RBP12.79□□□□□ -0.36
RCN1-202ENST00000506388 CDYL2Q8N8U2 506 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 GBP7Q8N8V2 638 aaPredicted RBP12.79□□□□□ -0.36
RCN1-202ENST00000506388 MFSD9Q8NBP5 474 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 TRPV3Q8NET8 790 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 TM4SF19Q96DZ7 209 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 TMEM74Q96NL1 305 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 ZFYVE21Q9BQ24 234 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 SPNS1Q9H2V7 528 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 PDE7BQ9NP56 450 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 ABCF3Q9NUQ8 709 aa12.79□□□□□ -0.36
RCN1-202ENST00000506388 MANBAO00462 879 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 ZNF195O14628 629 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 KIF1CO43896 1103 aaKnown RBP12.78□□□□□ -0.36
RCN1-202ENST00000506388 CTSVO60911 334 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 CLEC3AO75596 197 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
RCN1-202ENST00000506388 PRPH2P23942 346 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 MPSTP25325 297 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 HMOX2P30519 316 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 EMP3P54852 163 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 PWP1Q13610 501 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 RBM44Q6ZP01 1051 aaKnown RBP12.78□□□□□ -0.36
RCN1-202ENST00000506388 BPHLQ86WA6 291 aaPredicted RBP12.78□□□□□ -0.36
RCN1-202ENST00000506388 FAM20CQ8IXL6 584 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 PPM1MQ96MI6 270 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 ELOVL6Q9H5J4 265 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 TMEM9Q9P0T7 183 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 DMXL1Q9Y485 3027 aa12.78□□□□□ -0.36
RCN1-202ENST00000506388 TRPC5OSA6NMA1 111 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 TXNDC9O14530 226 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 HAT1O14929 419 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 CRCPO75575 148 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 PVRP15151 417 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 PDX1P52945 283 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 INSM1Q01101 510 aaPredicted RBP12.77□□□□□ -0.36
RCN1-202ENST00000506388 CSTF3Q12996 717 aaKnown RBP12.77□□□□□ -0.36
RCN1-202ENST00000506388 CUL3Q13618 768 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 ADPRMQ3LIE5 342 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 XKR7Q5GH72 579 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 FAM47EQ6ZV65 393 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 KIAA2013Q8IYS2 634 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 DCBLD1Q8N8Z6 715 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 ANKRD53Q8N9V6 530 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 ZNF740Q8NDX6 193 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 DEFB124Q8NES8 71 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 CREB3L4Q8TEY5 395 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 MAELQ96JY0 434 aaKnown RBP12.77□□□□□ -0.36
RCN1-202ENST00000506388 KCNA7Q96RP8 456 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 MEAF6Q9HAF1 191 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 FGFR1OP2Q9NVK5 253 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 PNPOQ9NVS9 261 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 RAPGEFL1Q9UHV5 662 aa12.77□□□□□ -0.36
RCN1-202ENST00000506388 ATXN7L1Q9ULK2 861 aaPredicted RBP12.77□□□□□ -0.36
RCN1-202ENST00000506388 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.36
RCN1-202ENST00000506388 KNTC1P50748 2209 aa12.77□□□□□ -0.37
RCN1-202ENST00000506388 CNOT1A5YKK6 2376 aaKnown RBP12.77□□□□□ -0.37
RCN1-202ENST00000506388 OR1F1O43749 312 aa12.77□□□□□ -0.37
RCN1-202ENST00000506388 LCMT2O60294 686 aaKnown RBP12.77□□□□□ -0.37
RCN1-202ENST00000506388 RASSF9O75901 435 aa12.77□□□□□ -0.37
RCN1-202ENST00000506388 SERPINA6P08185 405 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms