RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 DFFAO00273 331 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ATP6AP2O75787 350 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 POLBP06746 335 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 MMP2P08253 660 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 RFPL3SP0C7P2 107 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 EPB41P11171 864 aaKnown RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ERCC2P18074 760 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 USF1P22415 310 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 CMA1P23946 247 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 RPL13P26373 211 aaKnown RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 DPP4P27487 766 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 PTPN6P29350 595 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 PDHA2P29803 388 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 UGT2B10P36537 528 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 PPP1R2P41236 205 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 CCR8P51685 355 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 EMP3P54852 163 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 RPL26P61254 145 aaKnown RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 IRX1P78414 480 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SRSF4Q08170 494 aaKnown RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 NIPAL4Q0D2K0 466 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 FOXL1Q12952 345 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 DOC2BQ14184 412 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 PDK1Q15118 436 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 HERC1Q15751 4861 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 MAN2A1Q16706 1144 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TYSND1Q2T9J0 566 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TUSC1Q2TAM9 212 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 P3H1Q32P28 736 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 BCL7AQ4VC05 210 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SFT2D3Q587I9 215 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 FNBP1LQ5T0N5 605 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 DCST1Q5T197 706 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 NDUFAF5Q5TEU4 345 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TCERG1LQ5VWI1 586 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 GJB7Q6PEY0 223 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ADGRD1Q6QNK2 874 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF474Q6S9Z5 364 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 CYP4V2Q6ZWL3 525 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SLFN11Q7Z7L1 901 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ADGRE4PQ86SQ3 457 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 DTX2Q86UW9 622 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TTC29Q8NA56 475 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 NFAM1Q8NET5 270 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 LPCAT1Q8NF37 534 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 OR5AR1Q8NGP9 310 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 NEIL3Q8TAT5 605 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 RAB3IL1Q8TBN0 382 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 BRSK1Q8TDC3 778 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 FAM172AQ8WUF8 416 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 PROX1Q92786 737 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SMARCE1Q969G3 411 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 C18orf8Q96DM3 657 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 HSPBAP1Q96EW2 488 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 MVB12AQ96EY5 273 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 C11orf24Q96F05 449 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 RBM41Q96IZ5 413 aaKnown RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 FERD3LQ96RJ6 166 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TRIB3Q96RU7 358 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TIMP4Q99727 224 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 C11orf70Q9BRQ4 267 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 MED18Q9BUE0 208 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TRAF4Q9BUZ4 470 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SFXN3Q9BWM7 321 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 GRIP2Q9C0E4 1043 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 PRDM14Q9GZV8 571 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SLC6A15Q9H2J7 730 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 OCEL1Q9H607 264 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 C12orf49Q9H741 205 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 MVB12BQ9H7P6 319 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF703Q9H7S9 590 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 UGT1A8Q9HAW9 530 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 IL1RL2Q9HB29 575 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 BARX1Q9HBU1 254 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 IL26Q9NPH9 171 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ACSS1Q9NUB1 689 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 OR6C2Q9NZP2 312 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 CHMP5Q9NZZ3 219 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 KCMF1Q9P0J7 381 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 HCN3Q9P1Z3 774 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 FAM8A1Q9UBU6 413 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF223Q9UK11 482 aaPredicted RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TRHDEQ9UKU6 1024 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 RPL26L1Q9UNX3 145 aaKnown RBP3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SHOC2Q9UQ13 582 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SH2B3Q9UQQ2 575 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 KLK4Q9Y5K2 254 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 HEBP2Q9Y5Z4 205 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 SCINQ9Y6U3 715 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 HEATR1Q9H583 2144 aaKnown RBP3.05□□□□□ -1.92
TCOF1-208ENST00000506063 A0A0U1RQJ8 604 aa3.05□□□□□ -1.92
TCOF1-208ENST00000506063 LCE6AA0A183 80 aa3.05□□□□□ -1.92
TCOF1-208ENST00000506063 BICDL2A1A5D9 508 aa3.05□□□□□ -1.92
TCOF1-208ENST00000506063 PABPN1LA6NDY0 278 aaKnown RBP3.05□□□□□ -1.92
TCOF1-208ENST00000506063 SOWAHDA6NJG2 315 aa3.05□□□□□ -1.92
TCOF1-208ENST00000506063 LRRC3CA6NJW4 275 aa3.05□□□□□ -1.92
TCOF1-208ENST00000506063 G3V4G9 280 aa3.05□□□□□ -1.92
TCOF1-208ENST00000506063 PSMA7O14818 248 aa3.05□□□□□ -1.92
TCOF1-208ENST00000506063 PRKNO60260 465 aaPredicted RBP3.05□□□□□ -1.92
TCOF1-208ENST00000506063 UGT1A9O60656 530 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms