RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 DLGAP4Q9Y2H0 992 aa7.75□□□□□ -1.17
COL4A5-208ENST00000505728 LRRC42Q9Y546 428 aa7.75□□□□□ -1.17
COL4A5-208ENST00000505728 PCDHB11Q9Y5F2 797 aa7.75□□□□□ -1.17
COL4A5-208ENST00000505728 CFAP20Q9Y6A4 193 aaKnown RBP7.75□□□□□ -1.17
COL4A5-208ENST00000505728 TDRD6O60522 2096 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 A0A096LPI6 279 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TCRBV3S1A0A5B6 114 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 ANKDD1BA6NHY2 528 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 FAM170BA6NMN3 283 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 STK25O00506 426 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 SEMA3DO95025 777 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 CCNDBP1O95273 360 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 IGHV4-34P06331 123 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 DCNP07585 359 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TCN1P20061 433 aaPredicted RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TACR1P25103 407 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 HTR1EP28566 365 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TIA1P31483 386 aaKnown RBP eCLIP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 RPL3P39023 403 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TRPC1P48995 793 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 REEP5Q00765 189 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 RHDQ02161 417 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PRDX1Q06830 199 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 LRRC74AQ0VAA2 488 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 FZD5Q13467 585 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 MAP7Q14244 749 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 CAPRIN1Q14444 709 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 RBBP5Q15291 538 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 AASDHQ4L235 1098 aaPredicted RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 RUNDC3AQ59EK9 446 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 SPANXN4Q5MJ08 99 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 LRRC74BQ6ZQY2 392 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 Q6ZSR6 202 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 GPR180Q86V85 440 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 DHFR2Q86XF0 187 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PROSER1Q86XN7 944 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PTRH1Q86Y79 214 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TMEM126BQ8IUX1 230 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 SYT12Q8IV01 421 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 METTL4Q8N3J2 472 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 KRTCAP2Q8N6L1 136 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 C1orf52Q8N6N3 182 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 RNF148Q8N7C7 305 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 HIPK4Q8NE63 616 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 BHLHE22Q8NFJ8 381 aaPredicted RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TTLQ8NG68 377 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 OR52E1Q8NGJ3 308 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 DNAJB14Q8TBM8 379 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PYDC1Q8WXC3 89 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 CXorf40BQ96DE9 158 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 ITCHQ96J02 903 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 SLC45A3Q96JT2 553 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 LRGUKQ96M69 825 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TSSK3Q96PN8 268 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PRPF18Q99633 342 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 SLC39A3Q9BRY0 314 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 FOXQ1Q9C009 403 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PCED1AQ9H1Q7 454 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 VCX3BQ9H321 246 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 C6orf106Q9H6K1 298 aaPredicted RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PRM3Q9NNZ6 103 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 DMRT3Q9NQL9 472 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 PRDM8Q9NQV8 689 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 IMP3Q9NV31 184 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TMEM184CQ9NVA4 438 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 C6orf203Q9P0P8 240 aaPredicted RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 ACTR3BQ9P1U1 418 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 TAC3Q9UHF0 121 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 MCM8Q9UJA3 840 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 CYP8B1Q9UNU6 501 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 CA5BQ9Y2D0 317 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 WBP11Q9Y2W2 641 aaKnown RBP7.74□□□□□ -1.17
COL4A5-208ENST00000505728 DGKBQ9Y6T7 804 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 R4GN57 208 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 SPTBN2O15020 2390 aa7.74□□□□□ -1.17
COL4A5-208ENST00000505728 SNRNP200O75643 2136 aaKnown RBP7.73□□□□□ -1.17
COL4A5-208ENST00000505728 TRBV5-3A0A0A0MS03 114 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 IGHV1OR15-9A0A0B4J2B8 117 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 A0A1W2PPC4 97 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 OR5K4A6NMS3 321 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 H0Y8X5 98 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 H3BNX3 289 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 PRICKLE3O43900 615 aaPredicted RBP7.73□□□□□ -1.17
COL4A5-208ENST00000505728 RASGRP1O95267 797 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 ETHE1O95571 254 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 C8BP07358 591 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 ANXA4P09525 319 aaPredicted RBP7.73□□□□□ -1.17
COL4A5-208ENST00000505728 UMPSP11172 480 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 GSTM2P28161 218 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 SHMT2P34897 504 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 MSX2P35548 267 aaPredicted RBP7.73□□□□□ -1.17
COL4A5-208ENST00000505728 ACTR1BP42025 376 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 KIR3DL1P43629 444 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 GSK3BP49841 420 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 ACTR1AP61163 376 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 PHC1P78364 1004 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 CSNK1G2P78368 415 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 RAE1P78406 368 aaKnown RBP7.73□□□□□ -1.17
COL4A5-208ENST00000505728 LIPEQ05469 1076 aa7.73□□□□□ -1.17
COL4A5-208ENST00000505728 ILF3Q12906 894 aaKnown RBP eCLIP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms