RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 USP30Q70CQ3 517 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 FAM129CQ86XR2 697 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 NCLNQ969V3 563 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 TBC1D20Q96BZ9 403 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 QRFPRQ96P65 431 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZDHHC4Q9NPG8 344 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 FBXL12Q9NXK8 326 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 RPS6KA6Q9UK32 745 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 USP22Q9UPT9 525 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 SLC17A4Q9Y2C5 497 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 ARHGAP10A1A4S6 786 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 MYF6P23409 242 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 RPL5P46777 297 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 RPS9P46781 194 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 MERTKQ12866 999 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 VEZF1Q14119 521 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 C2orf27AQ580R0 203 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 GPR155Q7Z3F1 870 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 HORMAD1Q86X24 394 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 ADHFE1Q8IWW8 467 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 ABHD11Q8NFV4 315 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 OR7A2PQ8NGA2 310 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 OR5AR1Q8NGP9 310 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 GOT1L1Q8NHS2 421 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 NUDT8Q8WV74 236 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 ADI1Q9BV57 179 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 C8orf33Q9H7E9 229 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 VPS4AQ9UN37 437 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZFR2Q9UPR6 939 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 ETHE1O95571 254 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 PABPC4LP0CB38 370 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 DRD1P21728 446 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 GSTM2P28161 218 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 TIE1P35590 1138 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 HTR4Q13639 388 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 PDE7AQ13946 482 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 GTDC1Q4AE62 458 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 LIN52Q52LA3 116 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 TRIML2Q8N7C3 387 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.62■□□□□ 0.256e-8■■□□□ 14.2
TRAPPC11-204ENST00000505676 GDF15Q99988 308 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 SLC17A9Q9BYT1 436 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 RAD21L1Q9H4I0 556 aa16.62■□□□□ 0.25
TRAPPC11-204ENST00000505676 CACNB4O00305 520 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 CLPTM1O96005 669 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZNF23P17027 643 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 IDSP22304 550 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 WASP42768 502 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 CCR8P51685 355 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 MRPS21P82921 87 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 TSTA3Q13630 321 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 PON2Q15165 354 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 SLC36A3Q495N2 470 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 PAGE2Q7Z2X7 111 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 COMMD6Q7Z4G1 85 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ANKRD46Q86W74 232 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 DENND6BQ8NEG7 585 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 GANCQ8TET4 914 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 VPS50Q96JG6 964 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 LGR4Q9BXB1 951 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 YTHDF1Q9BYJ9 559 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 MVB12BQ9H7P6 319 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 SLC23A2Q9UGH3 650 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 NCKAP1Q9Y2A7 1128 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 MYRFQ9Y2G1 1151 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 FAM149AA5PLN7 773 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 GABRR3A8MPY1 467 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 H6PDO95479 791 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ENGP17813 658 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 CDKN2CP42773 168 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 RXRGP48443 463 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ALDH3A2P51648 485 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 MYBPC1Q00872 1141 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 VMACQ2NL98 169 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZNF621Q6ZSS3 439 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZDHHC13Q8IUH4 622 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZCCHC7Q8N3Z6 543 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 RNF175Q8N4F7 328 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 DHRSXQ8N5I4 330 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 TTLQ8NG68 377 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZFP28Q8NHY6 868 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZNF764Q96H86 408 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 PYURFQ96I23 114 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 TBCDQ9BTW9 1192 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 MBNL1Q9NR56 388 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 AASDHPPTQ9NRN7 309 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 PCDHGB4Q9UN71 923 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 HEBP2Q9Y5Z4 205 aa16.61■□□□□ 0.25
TRAPPC11-204ENST00000505676 RFXAPO00287 272 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 EI24O14681 340 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 TBX19O60806 448 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 RNGTTO60942 597 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 SMIM18P0DKX4 95 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 LAMP1P11279 417 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 CTHP32929 405 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 CAPGP40121 348 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 TUBA4AP68366 448 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 REEP5Q00765 189 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 TEAD4Q15561 434 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 KCTD21Q4G0X4 260 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms