RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 COX4I1P13073 169 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 ACPPP15309 386 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 GNSP15586 552 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 SDC1P18827 310 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 POLR2CP19387 275 aaPredicted RBP9.96□□□□□ -0.82
TPM3-217ENST00000504663 CAPN3P20807 821 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 PIK3CBP42338 1070 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 CAPZBP47756 277 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 CPA2P48052 419 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 ACADVLP49748 655 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 LAPTM5Q13571 262 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 KRT33BQ14525 404 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 GSTA3Q16772 222 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 SLC5A12Q1EHB4 618 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 DUOXA1Q1HG43 343 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 HLA-BQ31612 363 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 ATP6AP1LQ52LC2 224 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 C10orf62Q5T681 223 aaPredicted RBP9.96□□□□□ -0.82
TPM3-217ENST00000504663 THEMIS2Q5TEJ8 643 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 PAOXQ6QHF9 649 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 SPESP1Q6UW49 350 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 TMIGD1Q6UXZ0 262 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 CCDC121Q6ZUS5 278 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 CEP68Q76N32 757 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 UBE3DQ7Z6J8 389 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 TRIM48Q8IWZ4 208 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 RAB42Q8N4Z0 105 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 OR2I1PQ8NGU4 316 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.96□□□□□ -0.82
TPM3-217ENST00000504663 PROKR1Q8TCW9 393 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 CHTF18Q8WVB6 975 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 UTP4Q969X6 686 aaKnown RBP9.96□□□□□ -0.82
TPM3-217ENST00000504663 PPP3R2Q96LZ3 170 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 TMEM74Q96NL1 305 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 PITHD1Q9GZP4 211 aaPredicted RBP9.96□□□□□ -0.82
TPM3-217ENST00000504663 ABCG4Q9H172 646 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 LRMDAQ9H2I8 198 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 MRPS30Q9NP92 439 aaKnown RBP9.96□□□□□ -0.82
TPM3-217ENST00000504663 TMEM184CQ9NVA4 438 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 C1orf109Q9NX04 203 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 TAGLN3Q9UI15 199 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 POMT2Q9UKY4 750 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 NEUROG3Q9Y4Z2 214 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 ASXL3Q9C0F0 2248 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 CACNA1HO95180 2353 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 ISM1B1AKI9 464 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 C9JVG2 144 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 HCRTR1O43613 425 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 SH3BP5O60239 455 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 KDM1AO60341 852 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 PRAMEF10O60809 474 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 CTSVO60911 334 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 CCNDBP1O95273 360 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 PCNAP12004 261 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 BCKDHAP12694 445 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 MYF5P13349 255 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 IDO1P14902 403 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 PVRP15151 417 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 MAGP20916 626 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 HNRNPH1P31943 449 aaKnown RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 UFM1P61960 85 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 IRX1P78414 480 aaPredicted RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 CFHR1Q03591 330 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 DDX39BQ13838 428 aaKnown RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 PTGR1Q14914 329 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 PLCL1Q15111 1095 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 SF1Q15637 639 aaKnown RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 LPAL2Q16609 132 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 ADPRMQ3LIE5 342 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 PAGE2BQ5JRK9 111 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 IL23RQ5VWK5 629 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 C8orf82Q6P1X6 216 aaPredicted RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 GALNT18Q6P9A2 607 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 CYP20A1Q6UW02 462 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 RIPOR1Q6ZS17 1223 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 RNF44Q7L0R7 432 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 RETREG3Q86VR2 466 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 SNX32Q86XE0 403 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 GATAD2AQ86YP4 633 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 RIMKLAQ8IXN7 391 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 ARL10Q8N8L6 244 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 FNDC5Q8NAU1 212 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 WDR48Q8TAF3 677 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 NSL1Q96IY1 281 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 AIF1LQ9BQI0 150 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 DPH7Q9BTV6 452 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 MRPL1Q9BYD6 325 aaKnown RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 SMOC1Q9H4F8 434 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 NLGN3Q9NZ94 848 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 ZIM2Q9NZV7 527 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 ANKMY1Q9P2S6 941 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 EXO1Q9UQ84 846 aaKnown RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 ENTPD2Q9Y5L3 495 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 R4GN57 208 aa9.95□□□□□ -0.82
TPM3-217ENST00000504663 COL5A1P20908 1838 aaPredicted RBP9.95□□□□□ -0.82
TPM3-217ENST00000504663 A0A0J9YY10 115 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 C2orf74A8MZ97 194 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 PRR33A8MZF0 331 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms