RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ZNF676Q8N7Q3 588 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 HMGB4Q8WW32 186 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SLC2A13Q96QE2 648 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 HIST1H2AAQ96QV6 131 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 TM9SF3Q9HD45 589 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 PNO1Q9NRX1 252 aaKnown RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SNAI1O95863 264 aaPredicted RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 JUNP05412 331 aaKnown RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 DBIP07108 87 aaKnown RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 DLDP09622 509 aaKnown RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 C10orf62Q5T681 223 aaPredicted RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 PDSS2Q86YH6 399 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SLC22A15Q8IZD6 547 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 OR5T3Q8NGG3 340 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 OR9A1PQ8NGU1 263 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 GRHL3Q8TE85 626 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 ARMC5Q96C12 935 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 DCSTAMPQ9H295 470 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 CHMP1AQ9HD42 196 aaPredicted RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 TUBA4AP68366 448 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 FAM182AQ5T1J6 154 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 CTU1Q7Z7A3 348 aaKnown RBP16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 PCYT2Q99447 389 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 EPYCQ99645 322 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 MALT1Q9UDY8 824 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 WNT6Q9Y6F9 365 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 RPS13P62277 151 aaKnown RBP16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 TMEM74Q96NL1 305 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 CITED4Q96RK1 184 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF382Q96SR6 550 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 KXD1Q9BQD3 176 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 EHD1Q9H4M9 534 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 DOT1LQ8TEK3 1739 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 OR14I1A6ND48 311 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 FAM170BA6NMN3 283 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 LEFTY2O00292 366 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 TUBA1BP68363 451 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 CSTF1Q05048 431 aaKnown RBP16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 RABL3Q5HYI8 236 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 TUBA1AQ71U36 451 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 DNAJA4Q8WW22 397 aaPredicted RBP16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 PPP1R14BQ96C90 147 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 SHISA4Q96DD7 197 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 KCNA7Q96RP8 456 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 FBXL12Q9NXK8 326 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 TEX46H3BTG2 121 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 MID1O15344 667 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 CHRNA1P02708 482 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 LEPRP48357 1165 aaKnown RBP16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 MC1RQ01726 317 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 RING1Q06587 406 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 UPP1Q16831 310 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 TMCO2Q7Z6W1 182 aaPredicted RBP16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF366Q8N895 744 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 C15orf40Q8WUR7 153 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 B4GALT6Q9UBX8 382 aa16.04■□□□□ 0.16
PCDHA1-203ENST00000504120 B4DGG1 531 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 MAP3K8P41279 467 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 CREB5Q02930 508 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 SYVN1Q86TM6 617 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 STX12Q86Y82 276 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 UBE2J2Q8N2K1 259 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 GRPEL2Q8TAA5 225 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 Q9N2J8 555 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 AASSQ9UDR5 926 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 RGPD5Q99666 1765 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF432O94892 652 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 TEAD2Q15562 447 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 AMZ1Q400G9 498 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 ZDHHC14Q8IZN3 488 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 AQP11Q8NBQ7 271 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 TXNDC5Q8NBS9 432 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 SLC25A36Q96CQ1 311 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 COQ8BQ96D53 544 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 PCDHGA10Q9Y5H3 936 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 CFAP20Q9Y6A4 193 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 ENTPD6O75354 484 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 SLC2A2P11168 524 aaPredicted RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 TUBA3CQ13748 450 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 COLEC12Q5KU26 742 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 MARCH9Q86YJ5 346 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 PLD6Q8N2A8 252 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 PROKR2Q8NFJ6 384 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 IMP4Q96G21 291 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 ALPK1Q96QP1 1244 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 TLR9Q9NR96 1032 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 PSKH1P11801 424 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 MAPK14Q16539 360 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 DNM1P34Q6PK57 102 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 C6orf89Q6UWU4 347 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 TICAM1Q8IUC6 712 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 UMODL1-AS1Q8N2C9 162 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 OR51B5Q9H339 312 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 ELAC1Q9H777 363 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 RPF2Q9H7B2 306 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 A0A1W2PQ45 241 aaPredicted RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 A0A1W2PQY0 241 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms