RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 KRT87PA6NCN2 255 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 MROH6A6NGR9 719 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 TPP2P29144 1249 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 PPARGP37231 505 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 RFC3P40938 356 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 XCR1P46094 333 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 DLX5P56178 289 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 SFT2D3Q587I9 215 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 CMPK2Q5EBM0 449 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 CDC20BQ86Y33 519 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 KRT222Q8N1A0 295 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 OR9A4Q8NGU2 314 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 OR51Q1Q8NH59 317 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 C16orf52Q8NHV5 167 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 FOPNLQ96NB1 174 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 HEMGNQ9BXL5 484 aa14.86□□□□□ -0.03
PDLIM7-210ENST00000503827 DNAJC13O75165 2243 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 JMJD1CQ15652 2540 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 OR2W5A6NFC9 320 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 PDE9AO76083 593 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 RAF1P04049 648 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 EZRP15311 586 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 RPA3P35244 121 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 KIR2DL3P43628 341 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 ZFP36L2P47974 494 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 ITGA8P53708 1063 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 DEFB113Q30KQ7 82 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 EMC4Q5J8M3 183 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 KCTD11Q693B1 232 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 DARS2Q6PI48 645 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 PAOXQ6QHF9 649 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 AFTPHQ6ULP2 937 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 PAMR1Q6UXH9 720 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 ZNF227Q86WZ6 799 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 SULF2Q8IWU5 870 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 KLHDC8BQ8IXV7 354 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 KATNAL2Q8IYT4 538 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 MRFAP1L1Q96HT8 127 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 TRIM45Q9H8W5 580 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 LRRC40Q9H9A6 602 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 PLSCR2Q9NRY7 297 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 PCYOX1Q9UHG3 505 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 ZNF407Q9C0G0 2248 aa14.85□□□□□ -0.03
PDLIM7-210ENST00000503827 CSPG4Q6UVK1 2322 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 FN1P02751 2386 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 MACROD2A1Z1Q3 448 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 P2RX6O15547 441 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 AKR1B10O60218 316 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 NSA2O95478 260 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 GOT2P00505 430 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 GYPCP04921 128 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 RBP3P10745 1247 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 CTNNA2P26232 953 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 PEX19P40855 299 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 SLC26A5P58743 744 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 EIF3EP60228 445 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 RELAQ04206 551 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 TSTA3Q13630 321 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 KEAP1Q14145 624 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 USP10Q14694 798 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 NSDHLQ15738 373 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 ASTE1Q2TB18 679 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 ZNF425Q6IV72 752 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 SUSD1Q6UWL2 747 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 ACTL9Q8TC94 416 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 ELP5Q8TE02 316 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 SMPDL3AQ92484 453 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 PANX3Q96QZ0 392 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 PIH1D1Q9NWS0 290 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 HCN3Q9P1Z3 774 aa14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 RUVBL2Q9Y230 463 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-210ENST00000503827 IGKV1-8A0A0C4DH67 115 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 KPNA5O15131 536 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 PEX1O43933 1283 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 CCNDBP1O95273 360 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 HOXC12P31275 282 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 HLCSP50747 726 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 PRDX1Q06830 199 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 ABRAXAS2Q15018 415 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 GXYLT1Q4G148 440 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 CCDC38Q502W7 563 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 FASTKD1Q53R41 847 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 PTRHD1Q6GMV3 140 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 PCGF5Q86SE9 256 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 OR52N2Q8NGI0 321 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 OR4L1Q8NH43 312 aa14.83□□□□□ -0.04
PDLIM7-210ENST00000503827 VPS13CQ709C8 3753 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 A6NNC1 897 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 NPIPA2E9PIF3 369 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 NPIPA3F8WFD2 350 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 FCHO1O14526 889 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 ACVR2AP27037 513 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 TRHRP34981 398 aaPredicted RBP14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 BCL6P41182 706 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 OR4D2P58180 307 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 MLF1P58340 268 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 SNTB1Q13884 538 aaKnown RBP14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 PARP6Q2NL67 630 aa14.82□□□□□ -0.04
PDLIM7-210ENST00000503827 SLC25A35Q3KQZ1 300 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms