RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SPP1P10451 314 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 LBPP18428 481 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 LHCGRP22888 699 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PSMB4P28070 264 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 MAP2K2P36507 400 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 MFAP3P55082 362 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 POLR2FP61218 127 aaKnown RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TUBB4BP68371 445 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TEFQ10587 303 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TRAP1Q12931 704 aaKnown RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 CBX3Q13185 183 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 RCN2Q14257 317 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TAZQ16635 292 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 MEP1BQ16820 701 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 GTDC1Q4AE62 458 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZRANB3Q5FWF4 1079 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 SLC25A53Q5H9E4 307 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TOR1AIP1Q5JTV8 583 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 LCN1P1Q5VSP4 162 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 AMIGO1Q86WK6 493 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 KLHL7Q8IXQ5 586 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 SYCP3Q8IZU3 236 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 APCDD1Q8J025 514 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 HDDC3Q8N4P3 179 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 KLHDC1Q8N7A1 406 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 CNBD1Q8NA66 436 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 ATAD1Q8NBU5 361 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZNF485Q8NCK3 441 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR4C3Q8NH37 302 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 HPSE2Q8WWQ2 592 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 CORO2AQ92828 525 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TSACCQ96A04 125 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PYCR2Q96C36 320 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 GIMAP5Q96F15 307 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PGM2Q96G03 612 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 BSCL2Q96G97 398 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TMEM237Q96Q45 408 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 MINDY3Q9H8M7 445 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 CHST11Q9NPF2 352 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PKD2L2Q9NZM6 624 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 AKAP7Q9P0M2 348 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 IL19Q9UHD0 177 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 DUSP12Q9UNI6 340 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 CHKBQ9Y259 395 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 RRP15Q9Y3B9 282 aaKnown RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 R4GN57 208 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 HEG1Q9ULI3 1381 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 KIAA1210Q9ULL0 1709 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 C5orf52A6NGY3 159 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 IFIT3O14879 490 aaKnown RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 EPHB6O15197 1021 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 PPIP5K2O43314 1243 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 SELENOFO60613 162 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 FCGR3BO75015 233 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 CDC123O75794 336 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 NADKO95544 446 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 APOHP02749 345 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 AMBPP02760 352 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 GPIP06744 558 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 PATE4P0C8F1 98 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 RPS2P15880 293 aaKnown RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 EPORP19235 508 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 TYMPP19971 482 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ALDH4A1P30038 563 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ALDH1B1P30837 517 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 CHRNB4P30926 498 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 SOAT1P35610 550 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 CDKN1AP38936 164 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 CASP3P42574 277 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 MAGEA11P43364 429 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 KCNJ1P48048 391 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 GPC3P51654 580 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 LBX1P52954 281 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 STX1BP61266 288 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 HMGN5P82970 282 aaKnown RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 RBBP7Q16576 425 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 CDO1Q16878 200 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 TWISTNBQ3B726 338 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 GLIPR1L2Q4G1C9 344 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANKRD20A4Q4UJ75 823 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 HSP90AA5PQ58FG0 334 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANKRD20A8PQ5CZ79 823 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 FFAR4Q5NUL3 377 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANKRD20A2Q5SQ80 823 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 SPOUT1Q5T280 376 aaKnown RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANKRD20A1Q5TYW2 823 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANKRD20A3Q5VUR7 823 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 SUSD4Q5VX71 490 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 BSPRYQ5W0U4 402 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 LYSMD4Q5XG99 296 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 TXNRD3NBQ6F5E7 133 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 ETFRF1Q6IPR1 90 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM53AQ6NSI3 398 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 UGT3A1Q6NUS8 523 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 CYB5D1Q6P9G0 228 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 CTR9Q6PD62 1173 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 C15orf39Q6ZRI6 1047 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 LINC00696Q6ZRV3 163 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 IL17RELQ6ZVW7 336 aa2.17□□□□□ -2.06
HMGB1P35-201ENST00000503360 G2E3Q7L622 706 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms