RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CXCR4P61073 352 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 PPP3R1P63098 170 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 SMAD3P84022 425 aaKnown RBP16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 TPGS1Q6ZTW0 290 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 SLC35A5Q9BS91 424 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 RANBP3Q9H6Z4 567 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 IL1RAPQ9NPH3 570 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 GRIN3AQ8TCU5 1115 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 C11orf49Q9H6J7 331 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 ISM1B1AKI9 464 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 CDK6Q00534 326 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 GSTM4Q03013 218 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 RCAN2Q14206 197 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 PPP2R2DQ66LE6 453 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 LRRC66Q68CR7 880 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 LINGO4Q6UY18 593 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 LINC00471Q8N535 108 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 TNFAIP8L1Q8WVP5 186 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 PCYT2Q99447 389 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 WDR83Q9BRX9 315 aaKnown RBP16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 CD244Q9BZW8 370 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 HCN2Q9UL51 889 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 VIPP01282 170 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 H1F0P07305 194 aaKnown RBP16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 GARNL3Q5VVW2 1013 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 FBXL22Q6P050 247 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 LINC00299Q6ZSB3 139 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 CHMP1BQ7LBR1 199 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 MUL1Q969V5 352 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 MCMBPQ9BTE3 642 aa16.71■□□□□ 0.27
HMGXB3-201ENST00000502717 PCDH7O60245 1069 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 LCKP06239 509 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 CD247P20963 164 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 GSTM3P21266 225 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 CD68P34810 354 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 ARHGAP1Q07960 439 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 RD3Q7Z3Z2 195 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 CHIAQ9BZP6 476 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 A0A1W2PRB8 838 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 TCRBV5S1A1TA0A578 114 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 PIRO00625 290 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 MITFO75030 526 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 GDF5P43026 501 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 OR4D1Q15615 310 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 AAK1Q2M2I8 961 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 JUNP05412 331 aaKnown RBP16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 SKP1P63208 163 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 ZNF630Q2M218 657 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 BEND5Q7L4P6 421 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 ADGRD2Q7Z7M1 963 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 RBM23Q86U06 439 aaKnown RBP16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 NOXA1Q86UR1 476 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 TP53INP2Q8IXH6 220 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 C11orf84Q9BUA3 381 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 ZSCAN5AQ9BUG6 496 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 SRRDQ9UH36 339 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 CDH7Q9ULB5 785 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 IRS2Q9Y4H2 1338 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 C1QTNF3-AMACRE9PGA6 284 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 ASGR1P07306 291 aa16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 JUNBP17275 347 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-201ENST00000502717 OR14I1A6ND48 311 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 CLCA1A8K7I4 914 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 ATG13O75143 517 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 CORO1AP31146 461 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 SMSP52788 366 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 SERINC3Q13530 473 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 TIGD5Q53EQ6 642 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 ZNF311Q5JNZ3 666 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 C17orf64Q86WR6 236 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 OR10T2Q8NGX3 314 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 HYLS1Q96M11 299 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 PKP4Q99569 1192 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 ARL5CA6NH57 179 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 SEC14L2O76054 403 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 RHAGQ02094 409 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 PLA2G4EQ3MJ16 856 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 AKIRIN2Q53H80 203 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 ZNF613Q6PF04 617 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 MOSPD2Q8NHP6 518 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 MSANTD3Q96H12 275 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 H3BM21 787 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 MAFKO60675 156 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 DSTNP60981 165 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 FPGSQ05932 587 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 SCRN3Q0VDG4 424 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 PLPP4Q5VZY2 271 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 NPWQ8N729 165 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 COL26A1Q96A83 441 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 MARCH4Q9P2E8 410 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 PRMT3O60678 531 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 AP1S2P56377 157 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 RPA4Q13156 261 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 PTPRCAPQ14761 206 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 NDUFA9Q16795 377 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 SPIN4Q56A73 249 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 SERPINA13PQ6UXR4 307 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 VWA5B2Q8N398 1253 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms