RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 GALNT6Q8NCL4 622 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 LSM14AQ8ND56 463 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 TRPV3Q8NET8 790 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 NT5CQ8TCD5 201 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 UBE2E3Q969T4 207 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 CLIP3Q96DZ5 547 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 MRRFQ96E11 262 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 PTCD3Q96EY7 689 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 WBP1Q96G27 269 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 MAGEB10Q96LZ2 347 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 VPS11Q9H270 941 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 GPN2Q9H9Y4 310 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 CUTCQ9NTM9 273 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 TXLNGQ9NUQ3 528 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SENP1Q9P0U3 644 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 ZFP69BQ9UJL9 534 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 NXT1Q9UKK6 140 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 PPT2Q9UMR5 302 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 CDC14AQ9UNH5 594 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 KLHL20Q9Y2M5 609 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 MDC1Q14676 2089 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SPTBP11277 2137 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 LOC105369274A0A096LPK9 316 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 LOC102723532A0A0G2JNH3 316 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 LOC101059948A0A1B0GTJ6 334 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 HYKKA2RU49 373 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 URADA6NGE7 173 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 ZNF891A8MT65 544 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 C9J4A7 227 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 H0YIG0 161 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 UBXN8O00124 270 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 EFSO43281 561 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 GLRA3O75311 464 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 ERLIN1O75477 346 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 NSA2O95478 260 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 NTRK1P04629 796 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 SERPINA6P08185 405 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 LIFP15018 202 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 EPB42P16452 691 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 PTPN4P29074 926 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 CRHR1P34998 444 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 CCT5P48643 541 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 SKP1P63208 163 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC18A2Q05940 514 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 DNASE1L3Q13609 305 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 TSTA3Q13630 321 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 NCF4Q15080 339 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 TGIF1Q15583 401 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 CCDC153Q494R4 210 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 NKAIN1Q4KMZ8 207 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 PAGE2BQ5JRK9 111 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 LIPJQ5W064 366 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 TMEM214Q6NUQ4 689 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 ADCK2Q7Z695 626 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC22A9Q8IVM8 553 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 IQCKQ8N0W5 287 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 OR4N4Q8N0Y3 316 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 KRT78Q8N1N4 520 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 AFAP1L2Q8N4X5 818 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 CSNK1A1LQ8N752 337 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 UHMK1Q8TAS1 419 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 ALKBH8Q96BT7 664 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 CCDC126Q96EE4 140 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 C10orf90Q96M02 699 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 IP6K3Q96PC2 410 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC7A5P2Q9GIP4 190 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 TGIF2Q9GZN2 237 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 SPRTNQ9H040 489 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 RHBGQ9H310 441 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 PSD3Q9NYI0 1048 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 XPR1Q9UBH6 696 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 OPTCQ9UBM4 332 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 ADGRE2Q9UHX3 823 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 CROTQ9UKG9 612 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 SH2B3Q9UQQ2 575 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 PADI2Q9Y2J8 665 aa10.23□□□□□ -0.77
UBE2D3-212ENST00000502563 NCF1BA6NI72 391 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 VSTM2BA6NLU5 285 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 NCF1CA8MVU1 366 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 SUPT3HB4E1H0 165 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 H3BQF6 201 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 E2F3O00716 465 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 CLGNO14967 610 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 NRP2O60462 931 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 SMIM24O75264 130 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 H2AFYO75367 372 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 SUPT3HO75486 399 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 CLEC3AO75596 197 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 KLF7O75840 302 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 RPS17P08708 135 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 SBK3P0C264 359 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 GFAPP14136 432 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 NCF1P14598 390 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 EPORP19235 508 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 TCN2P20062 427 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 IL10P22301 178 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 ITPKBP27987 946 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 DLSTP36957 453 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 BCL6P41182 706 aa10.22□□□□□ -0.77
UBE2D3-212ENST00000502563 HNF4AP41235 474 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms