RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 OGTO15294 1046 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ADAM12O43184 909 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TBX19O60806 448 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATP6V1G1O75348 118 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 VPS26AO75436 327 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ECI2O75521 394 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 MFN2O95140 757 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 SPDEFO95238 335 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 UGT2B4P06133 528 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 HMBSP08397 361 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 IL6RP08887 468 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 RAB40ALP0C0E4 278 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 NPSP0C0P6 89 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 NR2F6P10588 404 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 CCDC130P13994 396 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 SRD5A1P18405 259 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 MX1P20591 662 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TGM2P21980 687 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 PAICSP22234 425 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 MPZP25189 248 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 CTGFP29279 349 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 NPBWR1P48145 328 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF84P51523 738 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 GSDMDP57764 484 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 WDR5P61964 334 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 BLOC1S1P78537 153 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 SREBF2Q12772 1141 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 SRSF5Q13243 272 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 SYT16Q17RD7 645 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 CCNYL2Q5T2Q4 361 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TRILQ7L0X0 811 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 DPPA4Q7L190 304 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 NRARPQ7Z6K4 114 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM126BQ8IUX1 230 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 CENPLQ8N0S6 344 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 C1orf87Q8N0U7 546 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 LCORLQ8N3X6 602 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 GALNT16Q8N428 558 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 BOLLQ8N9W6 283 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ABHD11Q8NFV4 315 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR8K3Q8NH51 312 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 EXD1Q8NHP7 514 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 HM13Q8TCT9 377 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMIGD2Q96BF3 282 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 MYEOVQ96EZ4 313 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 THOC3Q96J01 351 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 VCPIP1Q96JH7 1222 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 PBKQ96KB5 322 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 LRFN5Q96NI6 719 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLITRK1Q96PX8 696 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 MYADMQ96S97 322 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 MEIS3Q99687 375 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 COQ7Q99807 217 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 SPAG8Q99932 426 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM110AQ9BQ89 295 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 AIFM2Q9BRQ8 373 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 PCGF1Q9BSM1 259 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 KLC2Q9H0B6 622 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATG10Q9H0Y0 220 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM245Q9H330 911 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TOR3AQ9H497 397 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM231Q9H6L2 316 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 VAT1LQ9HCJ6 419 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 WDR6Q9NNW5 1121 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 GPR108Q9NPR9 543 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ECHDC1Q9NTX5 307 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 PIGVQ9NUD9 493 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 EXOC1Q9NV70 894 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 TRNAU1APQ9NX07 287 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATXN10Q9UBB4 475 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 DBNLQ9UJU6 430 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 AMFRQ9UKV5 643 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 AGO2Q9UKV8 859 aaKnown RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 FZD4Q9ULV1 537 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 FOXA2Q9Y261 457 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 PSME4Q14997 1843 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 MED23Q9ULK4 1368 aa4.13□□□□□ -1.75
HMGB1P21-201ENST00000502313 A0A0U1RQV5 110 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 A0A1W2PPQ1 181 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 HELTA6NFD8 242 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ANKUB1A6NFN9 424 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 CETN3O15182 167 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 NVLO15381 856 aaKnown RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 XRCC3O43542 346 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 SNNO75324 88 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 CSDE1O75534 798 aaKnown RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 RAD51DO75771 328 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 KDM4BO94953 1096 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 FGFR1OPO95684 399 aaKnown RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 TTLL1O95922 423 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ASNSP08243 561 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 PCNAP12004 261 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 HLA-FP30511 346 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR1D2P34982 312 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 PTGER1P34995 402 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 BMI1P35226 326 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 RFC2P35250 354 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 CETN2P41208 172 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 KCNJ4P48050 445 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 CYP2J2P51589 502 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms