RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RRADP55042 308 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 FOXL2P58012 376 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 DLG1Q12959 904 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 FAM83EQ2M2I3 478 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 LGSNQ5TDP6 509 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 NXPE4Q6UWF7 544 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 MED25Q71SY5 747 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 COX15Q7KZN9 410 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 TRMT10CQ7L0Y3 403 aaKnown RBP12.18□□□□□ -0.46
HSPG2-213ENST00000498495 TAOK1Q7L7X3 1001 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 VN1R4Q7Z5H5 301 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 TMPRSS11BQ86T26 416 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 ZNF843Q8N446 348 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 TMEM102Q8N9M5 508 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-213ENST00000498495 LRRN4CLQ8ND94 238 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 EXT2Q93063 718 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 ESAMQ96AP7 390 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 MIEF2Q96C03 454 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 PAFAH2Q99487 392 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 MACROD1Q9BQ69 325 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 AIF1LQ9BQI0 150 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 SARGQ9BW04 601 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 DRC3Q9H069 523 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 ING2Q9H160 280 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 SLC26A1Q9H2B4 701 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 SOX17Q9H6I2 414 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-213ENST00000498495 PELI2Q9HAT8 420 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 SNX15Q9NRS6 342 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 IGSF5Q9NSI5 407 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 NXT1Q9UKK6 140 aaKnown RBP12.18□□□□□ -0.46
HSPG2-213ENST00000498495 HEATR5BQ9P2D3 2071 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 FAM208BQ5VWN6 2430 aa12.18□□□□□ -0.46
HSPG2-213ENST00000498495 A0A0A6YYC8 382 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-213ENST00000498495 VSTM2BA6NLU5 285 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 I3L1I5 382 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-213ENST00000498495 CLGNO14967 610 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 FOXS1O43638 330 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 STK16O75716 305 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 C1QL1O75973 258 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 IPO13O94829 963 aaKnown RBP12.17□□□□□ -0.46
HSPG2-213ENST00000498495 IGHEP01854 428 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 SERPIND1P05546 499 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 SLC35G6P0C7Q6 338 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 C1GALT1C1LP0DN25 315 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 GGT5P36269 586 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 SLC6A12P48065 614 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 HSPA7P48741 367 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 SERPINB8P50452 374 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 NFATC3Q12968 1075 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 CHAF1BQ13112 559 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 ACAP2Q15057 778 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 RBBP5Q15291 538 aaKnown RBP12.17□□□□□ -0.46
HSPG2-213ENST00000498495 FBXO48Q5FWF7 155 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 VWA2Q5GFL6 755 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 TEX35Q5T0J7 233 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 KLC3Q6P597 504 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 SHISA6Q6ZSJ9 500 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 KLHDC8AQ8IYD2 350 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 KCT2Q8NC54 265 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 C9orf43Q8TAL5 461 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-213ENST00000498495 STT3BQ8TCJ2 826 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 KCTD4Q8WVF5 259 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 NACC2Q96BF6 587 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 FER1L6-AS2Q96M78 137 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 SPSB2Q99619 263 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 TRIM55Q9BYV6 548 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 VPS11Q9H270 941 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 ZNF71Q9NQZ8 489 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-213ENST00000498495 DNAJC11Q9NVH1 559 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 TRPC4Q9UBN4 977 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 CTSFQ9UBX1 484 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 ZNF180Q9UJW8 692 aa12.17□□□□□ -0.46
HSPG2-213ENST00000498495 PTBP2Q9UKA9 531 aaKnown RBP12.17□□□□□ -0.46
HSPG2-213ENST00000498495 MDC1Q14676 2089 aaKnown RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 EXOC1LA0A1B0GW35 172 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 CCDC189A1A4V9 331 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 SYCE1LA8MT33 242 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 SUPT3HB4E1H0 165 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 B8ZZF3 427 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 H0YIG0 161 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 MAP2K7O14733 419 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 NDUFS4O43181 175 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 RIPK2O43353 540 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 CCNT2O60583 730 aaKnown RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 KERAO60938 352 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 SUPT3HO75486 399 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 DNAJB5O75953 348 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 KLHL2O95198 593 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ALDOAP04075 364 aaKnown RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 UMODP07911 640 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ZGLP1P0C6A0 271 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 FAM153BP0C7A2 387 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 MMP11P24347 488 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 CNTFP26441 200 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 VARSP26640 1264 aaKnown RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 AHRP35869 848 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 SCTRP47872 440 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 GLRBP48167 497 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 CSRP3P50461 194 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 IRF9Q00978 393 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms