RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 BST1Q10588 318 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 RBBP5Q15291 538 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 TLDC1Q6P9B6 456 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 TMPRSS7Q7RTY8 843 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 MCATQ8IVS2 390 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 METTL6Q8TCB7 284 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 PPM1MQ96MI6 270 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 TEFMQ96QE5 360 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 OR2A5Q96R48 311 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 CENPKQ9BS16 269 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 FBXO8Q9NRD0 319 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 NMRK1Q9NWW6 199 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 HAO1Q9UJM8 370 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 RARRES3Q9UL19 164 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 DNAH14Q0VDD8 3507 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 A0A0J9YVX5 310 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 DCDC2BA2VCK2 349 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 FOXE1O00358 373 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 AZIN1O14977 448 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 SNNO75324 88 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 OR4F21O95013 312 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 HBQ1P09105 142 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 MDH1P40925 334 aaKnown RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 ARFIP1P53367 373 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 ITGA1P56199 1179 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 ERVPABLB-1P60509 514 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 SKP1P63208 163 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 SH3BP2P78314 561 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 TGM3Q08188 693 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 TUBB3Q13509 450 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 ZRSR2Q15696 482 aaKnown RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 ZIC1Q15915 447 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 CPSF6Q16630 551 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 NDUFA9Q16795 377 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 FRG2Q64ET8 278 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 LETMD1Q6P1Q0 360 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 FBXO42Q6P3S6 717 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 CEACAM20Q6UY09 585 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 RAB11FIP2Q7L804 512 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 B3GNT8Q7Z7M8 397 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 SYVN1Q86TM6 617 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 ASPGQ86U10 573 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 FAM20CQ8IXL6 584 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 TTC29Q8NA56 475 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 SRFBP1Q8NEF9 429 aaKnown RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 OR7G3Q8NG95 312 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 C7orf26Q96N11 449 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF285Q96NJ3 590 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 FRG2BQ96QU4 278 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 KLHL25Q9H0H3 589 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 CCDC134Q9H6E4 229 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 BRF2Q9HAW0 419 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 FGF21Q9NSA1 209 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 SIDT1Q9NXL6 827 aaKnown RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 FAM53CQ9NYF3 392 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 SRPK3Q9UPE1 567 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 KLHL20Q9Y2M5 609 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 RNF11Q9Y3C5 154 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 LOXL2Q9Y4K0 774 aa16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 COL27A1Q8IZC6 1860 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-215ENST00000498160 CEP250Q9BV73 2442 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 SERTM1A2A2V5 107 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 EFCAB7A8K855 629 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 PLD2O14939 933 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CTSVO60911 334 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 ULK1O75385 1050 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 SNRNP200O75643 2136 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CAPN1P07384 714 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 SERPINA6P08185 405 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 JMJD7P0C870 316 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CD22P20273 847 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 BCL6P41182 706 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 GABRA4P48169 554 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 RPL14P50914 215 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 ARSFP54793 590 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 STXBP1P61764 594 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 MC2RQ01718 297 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CSTF3Q12996 717 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 GRM7Q14831 915 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 C16orf72Q14CZ0 275 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 TMEM164Q5U3C3 297 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 GARNL3Q5VVW2 1013 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 RPS27LQ71UM5 84 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 PPP1R3BQ86XI6 285 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CRLF3Q8IUI8 442 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 LSMEM2Q8N112 164 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CDYL2Q8N8U2 506 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 GBP7Q8N8V2 638 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 RCBTB1Q8NDN9 531 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 SLC13A3Q8WWT9 602 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CCT6BQ92526 530 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 CMTM7Q96FZ5 175 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 ASPSCR1Q9BZE9 553 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 PRM3Q9NNZ6 103 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 FAM60AQ9NP50 221 aa16.8■□□□□ 0.28
CTDSP1-215ENST00000498160 A0A088AWK7 358 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 TMEM150CB9EJG8 249 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 POLR1CO15160 346 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 PRAMEF4O60810 478 aa16.79■□□□□ 0.28
CTDSP1-215ENST00000498160 PCNAP12004 261 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms