RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RPL26L1Q9UNX3 145 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CTNND2Q9UQB3 1225 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF256Q9Y2P7 627 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 POLR3HQ9Y535 204 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ASB1Q9Y576 335 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SESN1Q9Y6P5 492 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ALPK2Q86TB3 2170 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MAPK8IP3Q9UPT6 1336 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CYP2D7A0A087X1C5 515 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 B4DGG1 531 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 I3L4J1 428 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EIF1AYO14602 144 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CREG1O75629 220 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ACSL3O95573 720 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IGKV2-30P06310 120 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PGA4P0DJD7 388 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PGA3P0DJD8 388 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PGA5P0DJD9 388 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CD28P10747 220 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 HOXB2P14652 356 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ATICP31939 592 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MPLP40238 635 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CX3CR1P49238 355 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 STARD6P59095 220 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PIGFQ07326 219 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TRDNQ13061 729 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PRDX4Q13162 271 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SRSF9Q13242 221 aaKnown RBP eCLIP1.38□□□□□ -2.19
XRN1-214ENST00000498077 LY6DQ14210 128 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SMAD2Q15796 467 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM266Q2M3C6 531 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CEP55Q53EZ4 464 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FGD3Q5JSP0 725 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 BRMS1LQ5PSV4 323 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 LGSNQ5TDP6 509 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 AGAP9Q5VTM2 703 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ELP2Q6IA86 826 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TTC27Q6P3X3 843 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CEACAM20Q6UY09 585 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SEPT14Q6ZU15 432 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MOB1BQ7L9L4 216 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMC7Q7Z402 723 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 LHFPL4Q7Z7J7 247 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 DSG4Q86SJ6 1040 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF329Q86UD4 541 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RTN4RL2Q86UN3 420 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PDPNQ86YL7 162 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 HIPK1Q86Z02 1210 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CAMK1DQ8IU85 385 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MB21D2Q8IYB1 491 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ARHGAP24Q8N264 748 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ARMC10Q8N2F6 343 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF619Q8N2I2 560 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 KIF2BQ8N4N8 673 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF781Q8N8C0 355 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 GPR26Q8NDV2 337 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TRIM58Q8NG06 486 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 OR52L1Q8NGH7 329 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 AGAP11Q8TF27 550 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 HASPINQ8TF76 798 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 C2orf15Q8WU43 125 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 SPRYD4Q8WW59 207 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 BAALCQ8WXS3 180 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 KRT35Q92764 455 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ABTB1Q969K4 478 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CLPTM1LQ96KA5 538 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CLIC6Q96NY7 704 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ACAP3Q96P50 834 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ALPK1Q96QP1 1244 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NODALQ96S42 347 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MTERF1Q99551 399 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 LMF2Q9BU23 707 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 DUSP26Q9BV47 211 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TTLL2Q9BWV7 592 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 USP44Q9H0E7 712 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FAM234AQ9H0X4 552 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 VPS16Q9H269 839 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MMP25Q9NPA2 562 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 DKKL1Q9UK85 242 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TNFSF13BQ9Y275 285 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ANGPTL3Q9Y5C1 460 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PCDHGA2Q9Y5H1 932 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MRFAP1Q9Y605 127 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 SHANK1Q9Y566 2161 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PIEZO2Q9H5I5 2752 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 USP47Q96K76 1375 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 DNAJC25-GNG10A0A024R161 153 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CTAGE9A4FU28 777 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 ZNF716A6NP11 495 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 AGAP14A8MT82 685 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 GRM8O00222 908 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TMPRSS2O15393 492 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 MED7O43513 233 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 ZNF254O75437 659 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 WBP4O75554 376 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 NDUFB8O95169 186 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CXorf1O96002 111 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 MT-CYBP00156 380 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms