RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 RIMS3Q9UJD0 308 aa13.14□□□□□ -0.31
SPTBN1-205ENST00000496323 EXO1Q9UQ84 846 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-205ENST00000496323 ERVK-11Q9UQG0 969 aa13.14□□□□□ -0.31
SPTBN1-205ENST00000496323 PCDHB14Q9Y5E9 798 aa13.14□□□□□ -0.31
SPTBN1-205ENST00000496323 YY2O15391 372 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 PCDH7O60245 1069 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 KIR3DL1P43629 444 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 CCR5P51681 352 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 OR4D2P58180 307 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 KRT33BQ14525 404 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 RBBP5Q15291 538 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 MUM1Q2TAK8 710 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 RUNDC3AQ59EK9 446 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 ICE2Q659A1 982 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 ANKRD26P1Q6NSI1 321 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 FAM20CQ8IXL6 584 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 SYNPOQ8N3V7 929 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 CDC26Q8NHZ8 85 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 FAM110BQ8TC76 370 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 ZNF583Q96ND8 569 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 GUCD1Q96NT3 240 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 GPR174Q9BXC1 333 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 RHBGQ9H310 441 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 A0A096LPI6 279 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 FEZF1A0PJY2 475 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 A6NCN8 305 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 PRAMEF26H0Y7S4 382 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 PRICKLE3O43900 615 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 RASGRP1O95267 797 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 GBAP04062 536 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 LAMP1P11279 417 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 NCK1P16333 377 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 HRH2P25021 359 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 HTR1EP28566 365 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 REEP5Q00765 189 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 PRKCQQ04759 706 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 PRDX1Q06830 199 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 TAF11Q15544 211 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 HKDC1Q2TB90 917 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 SLC30A9Q6PML9 568 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 GPR180Q86V85 440 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 NRROSQ86YC3 692 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 METTL4Q8N3J2 472 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 TSTD1Q8NFU3 115 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 RLN3Q8WXF3 142 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 JPH3Q8WXH2 748 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 ITCHQ96J02 903 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 AIF1LQ9BQI0 150 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 PCOLCE2Q9UKZ9 415 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 AP4S1Q9Y587 144 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 SNX13Q9Y5W8 968 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 SLCO1B1Q9Y6L6 691 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 MYO10Q9HD67 2058 aa13.13□□□□□ -0.31
SPTBN1-205ENST00000496323 AQP12BA6NM10 295 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 GABRR3A8MPY1 467 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 SCAMP2O15127 329 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 ERN1O75460 977 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 GSNP06396 782 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 PIM1P11309 404 aaPredicted RBP13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 COX7A2P14406 83 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 FOSL2P15408 326 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 PTX3P26022 381 aaPredicted RBP13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 PEBP1P30086 187 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 SLC7A1P30825 629 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 ACTR1BP42025 376 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 ACTR1AP61163 376 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 CSNK1G2P78368 415 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 SRSF11Q05519 484 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 CYP4F3Q08477 520 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 TRIP10Q15642 601 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 MSANTD1Q6ZTZ1 278 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 AQP12AQ8IXF9 295 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 C10orf111Q8N326 155 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 OR8J2Q8NGG1 315 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 CANT1Q8WVQ1 401 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 AURKBQ96GD4 344 aaPredicted RBP13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 ORAI3Q9BRQ5 295 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 RAB11FIP5Q9BXF6 653 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 FOXQ1Q9C009 403 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 SPHK1Q9NYA1 384 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 DNAH14Q0VDD8 3507 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 GNG14A0A1W2PPG7 69 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 TCRBV5S2A0A599 114 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 CD6P30203 668 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 ASMTP46597 345 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 RABIFP47224 123 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 CYP4F2P78329 520 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 DPY19L1Q2PZI1 675 aa13.12□□□□□ -0.31
SPTBN1-205ENST00000496323 SWT1Q5T5J6 900 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms