RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 CYP4F3Q08477 520 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 C16orf72Q14CZ0 275 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 ISXQ2M1V0 245 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 ZC3H12BQ5HYM0 836 aaKnown RBP18.65■□□□□ 0.58
ATG3-208ENST00000495756 TMTC4Q5T4D3 741 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 KANK2Q63ZY3 851 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 CLEC6AQ6EIG7 209 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 ANKRD53Q8N9V6 530 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 MFSD9Q8NBP5 474 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 OR7G3Q8NG95 312 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 REPS1Q96D71 796 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 C7orf26Q96N11 449 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 OR2A5Q96R48 311 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 CLCA2Q9UQC9 943 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 TIMM22Q9Y584 194 aa18.65■□□□□ 0.58
ATG3-208ENST00000495756 MDC1Q14676 2089 aaKnown RBP18.64■□□□□ 0.58
ATG3-208ENST00000495756 DCDC2BA2VCK2 349 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 CSO75390 466 aaKnown RBP18.64■□□□□ 0.57
ATG3-208ENST00000495756 HMOX2P30519 316 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 AHRP35869 848 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 GABRA4P48169 554 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 RPL14P50914 215 aaKnown RBP18.64■□□□□ 0.57
ATG3-208ENST00000495756 DEFB110Q30KQ9 67 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 TCHHL1Q5QJ38 904 aaPredicted RBP18.64■□□□□ 0.57
ATG3-208ENST00000495756 FRG2Q64ET8 278 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 FRMPD2BQ6IN97 320 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 ADNP2Q6IQ32 1131 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 FAM47EQ6ZV65 393 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 MCATQ8IVS2 390 aaKnown RBP18.64■□□□□ 0.57
ATG3-208ENST00000495756 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.64■□□□□ 0.57
ATG3-208ENST00000495756 CLYBLQ8N0X4 340 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 AGBL5Q8NDL9 886 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 WDR20Q8TBZ3 569 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 THAP11Q96EK4 314 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 DEPDC7Q96QD5 511 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 FRG2BQ96QU4 278 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 RHBGQ9H310 441 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 ELOVL6Q9H5J4 265 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 DLL3Q9NYJ7 618 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 SNX6Q9UNH7 406 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 PLCL2Q9UPR0 1127 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 FIS1Q9Y3D6 152 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 TSC22D4Q9Y3Q8 395 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 ADAMTS20P59510 1910 aa18.64■□□□□ 0.57
ATG3-208ENST00000495756 MANBAO00462 879 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 KRT6AP02538 564 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 KRT6BP04259 564 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 MSL3P1P0C860 447 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 PCNAP12004 261 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 FOLR1P15328 257 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 SERPINB3P29508 390 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 CSTF2P33240 577 aaKnown RBP eCLIP18.63■□□□□ 0.57
ATG3-208ENST00000495756 KRT6CP48668 564 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 NEK2P51955 445 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 IFT88Q13099 833 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 C10orf62Q5T681 223 aaPredicted RBP18.63■□□□□ 0.57
ATG3-208ENST00000495756 VN1R4Q7Z5H5 301 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 CRLF3Q8IUI8 442 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 KIRREL3Q8IZU9 778 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 CHCHD4Q8N4Q1 142 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 TTLQ8NG68 377 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 SEC16BQ96JE7 1060 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 STRADBQ9C0K7 418 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 PNPOQ9NVS9 261 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 ZFP69BQ9UJL9 534 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 AP1M2Q9Y6Q5 423 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 SPTBN4Q9H254 2564 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 DCHS1Q96JQ0 3298 aa18.63■□□□□ 0.57
ATG3-208ENST00000495756 LOC105369274A0A096LPK9 316 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 LOC102723532A0A0G2JNH3 316 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 H0YGG7 62 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 AGRPO00253 132 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 ULK1O75385 1050 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 GSTM2P28161 218 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 SERPINB1P30740 379 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 ARF3P61204 181 aaPredicted RBP18.62■□□□□ 0.57
ATG3-208ENST00000495756 UGT3A2Q3SY77 523 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 SGO1Q5FBB7 561 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 VN1R5Q7Z5H4 357 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 OR4N4Q8N0Y3 316 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 HUS1BQ8NHY5 278 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 RERGQ96A58 199 aaPredicted RBP18.62■□□□□ 0.57
ATG3-208ENST00000495756 FARSBQ9NSD9 589 aaKnown RBP18.62■□□□□ 0.57
ATG3-208ENST00000495756 SIDT1Q9NXL6 827 aaKnown RBP18.62■□□□□ 0.57
ATG3-208ENST00000495756 DNAJC15Q9Y5T4 150 aa18.62■□□□□ 0.57
ATG3-208ENST00000495756 ANKDD1BA6NHY2 528 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 SRPX2O60687 465 aaPredicted RBP18.61■□□□□ 0.57
ATG3-208ENST00000495756 PIK3CBP42338 1070 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 HTR6P50406 440 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 VSX2P58304 361 aaPredicted RBP18.61■□□□□ 0.57
ATG3-208ENST00000495756 CYP4F2P78329 520 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 DDX39BQ13838 428 aaKnown RBP18.61■□□□□ 0.57
ATG3-208ENST00000495756 GPR19Q15760 415 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 TMPRSS12Q86WS5 348 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 HOMEZQ8IX15 550 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 CACTIN-AS1Q8N1I8 211 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 TRPV3Q8NET8 790 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 CREB3L4Q8TEY5 395 aa18.61■□□□□ 0.57
ATG3-208ENST00000495756 ZNF473Q8WTR7 871 aaKnown RBP18.61■□□□□ 0.57
ATG3-208ENST00000495756 SELENOMQ8WWX9 145 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms