RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 PTCD3Q96EY7 689 aaKnown RBP10.54□□□□□ -0.72
KDM1A-205ENST00000494920 PKNOX2Q96KN3 472 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 ATP6V1G3Q96LB4 118 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 C10orf90Q96M02 699 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 ZNF382Q96SR6 550 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 RUFY1Q96T51 708 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 SELENOSQ9BQE4 189 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 ZPBPQ9BS86 351 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 EFCAB11Q9BUY7 163 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 NTMT1Q9BV86 223 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 PITHD1Q9GZP4 211 aaPredicted RBP10.54□□□□□ -0.72
KDM1A-205ENST00000494920 AICDAQ9GZX7 198 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 SPRTNQ9H040 489 aaPredicted RBP10.54□□□□□ -0.72
KDM1A-205ENST00000494920 STMN4Q9H169 189 aaPredicted RBP10.54□□□□□ -0.72
KDM1A-205ENST00000494920 CENPHQ9H3R5 247 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 ACSS2Q9NR19 701 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 SCN3AQ9NY46 2000 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 CCDC88CQ9P219 2028 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 MID2Q9UJV3 735 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 RARRES3Q9UL19 164 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 ZNF490Q9ULM2 529 aaPredicted RBP10.54□□□□□ -0.72
KDM1A-205ENST00000494920 TSC22D4Q9Y3Q8 395 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 PCDHB3Q9Y5E6 796 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 NBEAQ8NFP9 2946 aa10.54□□□□□ -0.72
KDM1A-205ENST00000494920 FEZF1A0PJY2 475 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 BPGMP07738 259 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ITGAXP20702 1163 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ALDH3A1P30838 453 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 SLC5A2P31639 672 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ARRB2P32121 409 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 RORAP35398 523 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 AHRP35869 848 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 SERPINB4P48594 390 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 EMP3P54852 163 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 CDH13P55290 713 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 CLCQ05315 142 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 FOXM1Q08050 763 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 HYAL2Q12891 473 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 TBC1D25Q3MII6 688 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 TCTE1Q5JU00 501 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 DCAF12Q5T6F0 453 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 LIPMQ5VYY2 423 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 FAM219BQ5XKK7 198 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ADNP2Q6IQ32 1131 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 GRHL2Q6ISB3 625 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 LETMD1Q6P1Q0 360 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ZNF517Q6ZMY9 492 aaPredicted RBP10.53□□□□□ -0.72
KDM1A-205ENST00000494920 FRMD7Q6ZUT3 714 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 TIPARPQ7Z3E1 657 aaKnown RBP10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ADCK2Q7Z695 626 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 PPP1R3BQ86XI6 285 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.53□□□□□ -0.722e-6■■■■■ 163.7
KDM1A-205ENST00000494920 LAS2Q8IYD9 372 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 LSMEM2Q8N112 164 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ZNF578Q96N58 590 aaPredicted RBP10.53□□□□□ -0.72
KDM1A-205ENST00000494920 LRFN5Q96NI6 719 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 AIF1LQ9BQI0 150 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 MECRQ9BV79 373 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 GATA5Q9BWX5 397 aaPredicted RBP10.53□□□□□ -0.72
KDM1A-205ENST00000494920 ASPSCR1Q9BZE9 553 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 RHBGQ9H310 441 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 NOL11Q9H8H0 719 aaKnown RBP10.53□□□□□ -0.72
KDM1A-205ENST00000494920 IPPKQ9H8X2 491 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 FANCEQ9HB96 536 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 AP1M2Q9Y6Q5 423 aa10.53□□□□□ -0.72
KDM1A-205ENST00000494920 BSNQ9UPA5 3926 aa10.52□□□□□ -0.72
KDM1A-205ENST00000494920 TMEM120BA0PK00 339 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 H0YIV9 168 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 UBFD1O14562 309 aaKnown RBP10.52□□□□□ -0.73
KDM1A-205ENST00000494920 CLGNO14967 610 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 ZSCAN9O15535 394 aaPredicted RBP10.52□□□□□ -0.73
KDM1A-205ENST00000494920 TLX3O43711 291 aaPredicted RBP10.52□□□□□ -0.73
KDM1A-205ENST00000494920 TRIM13O60858 407 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 KATNA1O75449 491 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 OR2B3O76000 313 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 ZWINTO95229 277 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 ONECUT2O95948 504 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 TSPAN8P19075 237 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 CD82P27701 267 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 CCR10P46092 362 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 NAGLUP54802 743 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 VSX2P58304 361 aaPredicted RBP10.52□□□□□ -0.73
KDM1A-205ENST00000494920 IRF8Q02556 426 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 LCP2Q13094 533 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 MAP7Q14244 749 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 HKDC1Q2TB90 917 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 ADPRMQ3LIE5 342 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 XKR6Q5GH73 641 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 WASHC2DQ5SRD0 308 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 LIPJQ5W064 366 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 RHBDD2Q6NTF9 364 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 TLDC1Q6P9B6 456 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 CYB5D1Q6P9G0 228 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 FOXR1Q6PIV2 292 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 TMIGD1Q6UXZ0 262 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 AFAP1L2Q8N4X5 818 aa10.52□□□□□ -0.73
KDM1A-205ENST00000494920 CSNK1A1LQ8N752 337 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms