RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SMC6Q96SB8 1091 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 HAUS8Q9BT25 410 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 NDC1Q9BTX1 674 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 EFHD1Q9BUP0 239 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 NMRAL1Q9HBL8 299 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 ZNF358Q9NW07 568 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 KCND3Q9UK17 655 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 PTBP2Q9UKA9 531 aaKnown RBP16.34■□□□□ 0.21
SNX17-209ENST00000494893 RUVBL1Q9Y265 456 aaKnown RBP16.34■□□□□ 0.21
SNX17-209ENST00000494893 SLC22A14Q9Y267 594 aa16.34■□□□□ 0.21
SNX17-209ENST00000494893 FARSAQ9Y285 508 aaKnown RBP16.34■□□□□ 0.21
SNX17-209ENST00000494893 MRPS2Q9Y399 296 aaKnown RBP16.34■□□□□ 0.21
SNX17-209ENST00000494893 PCM1Q15154 2024 aa16.33■□□□□ 0.21
SNX17-209ENST00000494893 A0A1B0GX78 115 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 FEZF1A0PJY2 475 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 HYKKA2RU49 373 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 DSCR3O14972 297 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 CREG1O75629 220 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 ONECUT2O95948 504 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 RAB40ALP0C0E4 278 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 PYGBP11216 843 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 MTHFD2P13995 350 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 CREB1P16220 341 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 HRH2P25021 359 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 GGT5P36269 586 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 HNMTP50135 292 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 ARSFP54793 590 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 CDC20Q12834 499 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 IL10RAQ13651 578 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 SLC9A5Q14940 896 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 NCF4Q15080 339 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 LINC00303Q3SY05 128 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 NKAIN1Q4KMZ8 207 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 CRTC2Q53ET0 693 aaPredicted RBP16.33■□□□□ 0.2
SNX17-209ENST00000494893 CSNK1A1LQ8N752 337 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 TTC29Q8NA56 475 aaPredicted RBP16.33■□□□□ 0.2
SNX17-209ENST00000494893 SLC5A11Q8WWX8 675 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 MACROD1Q9BQ69 325 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 DPH2Q9BQC3 489 aaPredicted RBP16.33■□□□□ 0.2
SNX17-209ENST00000494893 GPR87Q9BY21 358 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 NLNQ9BYT8 704 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 SLC7A5P2Q9GIP4 190 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 SSU72Q9NP77 194 aaKnown RBP16.33■□□□□ 0.2
SNX17-209ENST00000494893 TXLNGQ9NUQ3 528 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 HEATR5BQ9P2D3 2071 aa16.33■□□□□ 0.2
SNX17-209ENST00000494893 KCNE1BA0A087WTH5 132 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 GOLGA8RI6L899 631 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 UBXN8O00124 270 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 PRAMEF4O60810 478 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 KERAO60938 352 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 KLF7O75840 302 aaPredicted RBP16.32■□□□□ 0.2
SNX17-209ENST00000494893 KLHL2O95198 593 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 EPORP19235 508 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 ALAS2P22557 587 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 GLRBP48167 497 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 HSPA7P48741 367 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 DCDP81605 110 aaKnown RBP16.32■□□□□ 0.2
SNX17-209ENST00000494893 ERV3-1Q14264 604 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 TBR1Q16650 682 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 CDKL4Q5MAI5 379 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 YOD1Q5VVQ6 348 aaPredicted RBP16.32■□□□□ 0.2
SNX17-209ENST00000494893 PRAMEF9Q5VWM5 478 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 MRPL14Q6P1L8 145 aaKnown RBP16.32■□□□□ 0.2
SNX17-209ENST00000494893 C16orf46Q6P387 395 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 ANKRD12Q6UB98 2062 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 C4orf33Q8N1A6 199 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 METTL27Q8N6F8 245 aaPredicted RBP16.32■□□□□ 0.2
SNX17-209ENST00000494893 ZSCAN1Q8NBB4 408 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 STAG3L4Q8TBR4 150 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 PCSK5Q92824 1860 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 EXT2Q93063 718 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 TM4SF19Q96DZ7 209 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 CABS1Q96KC9 395 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 SARGQ9BW04 601 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 VPS11Q9H270 941 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 TLK1Q9UKI8 766 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 RNF112Q9ULX5 631 aa16.32■□□□□ 0.2
SNX17-209ENST00000494893 WDR47O94967 919 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 NR1D1P20393 614 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 AGXTP21549 392 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 HPDP32754 393 aaPredicted RBP16.31■□□□□ 0.2
SNX17-209ENST00000494893 OR1D4P47884 311 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 AGTR2P50052 363 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 CCR8P51685 355 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 EMP3P54852 163 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 RPS15AP62244 130 aaKnown RBP16.31■□□□□ 0.2
SNX17-209ENST00000494893 REEP5Q00765 189 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 RHDQ02161 417 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 TAF1BQ53T94 588 aaPredicted RBP16.31■□□□□ 0.2
SNX17-209ENST00000494893 TECRLQ5HYJ1 363 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 SULT1C3Q6IMI6 304 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 NXPE4Q6UWF7 544 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 CCDC91Q7Z6B0 441 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 SHISA5Q8N114 240 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 BANPQ8N9N5 519 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 ADAMTS17Q8TE56 1095 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 EXTL1Q92935 676 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 WWOXQ9NZC7 414 aa16.31■□□□□ 0.2
SNX17-209ENST00000494893 NUDT4Q9NZJ9 180 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms