RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 UMODL1-AS1Q8N2C9 162 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 DTD1Q8TEA8 209 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 HTR3CQ8WXA8 447 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 LURAP1Q96LR2 239 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CYTH2Q99418 400 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 TXN2Q99757 166 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 SLC39A8Q9C0K1 460 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 RIMS4Q9H426 269 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 SAV1Q9H4B6 383 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ACOXLQ9NUZ1 547 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 HAO1Q9UJM8 370 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ACSL5Q9ULC5 683 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 PCDHGB5Q9Y5G0 923 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 R4GN57 208 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CHD5Q8TDI0 1954 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 EDDM13A0A1B0GTR0 161 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ARHGAP42A6NI28 874 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 OR6C70A6NIJ9 312 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 PSMD12O00232 456 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 MFSD11O43934 449 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 NOL3O60936 208 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 HEXIM1O94992 359 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 LCKP06239 509 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 FCER2P06734 321 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 RBP1P09455 135 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CLEC2LP0C7M8 214 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 TDGF1P13385 188 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 GABRG2P18507 467 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 GALP22466 123 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 STAT5AP42229 794 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ALDH3A2P51648 485 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CCR9P51686 369 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 NDST2P52849 883 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 NRLP54845 237 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 YBEYP58557 167 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 EIF3EP60228 445 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ERVK-8P63133 956 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 SLC3A1Q07837 685 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 DYRK1AQ13627 763 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF273Q14593 569 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 LRRC38Q5VT99 294 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 AFMIDQ63HM1 303 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ZFP1Q6P2D0 407 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 RFX6Q8HWS3 928 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 MCEMP1Q8IX19 187 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 TP53INP2Q8IXH6 220 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 LNX2Q8N448 690 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 MOSPD2Q8NHP6 518 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 PNPT1Q8TCS8 783 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 S100ZQ8WXG8 99 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ATOH1Q92858 354 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 RFT1Q96AA3 541 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ACE2Q9BYF1 805 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 SLC39A10Q9ULF5 831 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 C19orf53Q9UNZ5 99 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 HS3ST2Q9Y278 367 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 CRYL1Q9Y2S2 319 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
BRCA1-222ENST00000493919 ASB4Q9Y574 426 aa11.23□□□□□ -0.61
BRCA1-222ENST00000493919 A0A0G2JMP0 313 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 FRS3O43559 492 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 AKAP8O43823 692 aaKnown RBP11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ZMPSTE24O75844 475 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 TGM6O95932 706 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 PGRP06401 933 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 FAM58BPP0C7Q3 252 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ITIH2P19823 946 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 GNPDA1P46926 289 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 PRIM2P49643 509 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 DYNLT1P63172 113 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 MYBPC1Q00872 1141 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 SRSF5Q13243 272 aaKnown RBP11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF528Q3MIS6 628 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ZBTB37Q5TC79 503 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 NCBP2-AS2Q69YL0 99 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 C22orf39Q6P5X5 142 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 BRAT1Q6PJG6 821 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 LACC1Q8IV20 430 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ARHGAP12Q8IWW6 846 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 KRT78Q8N1N4 520 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ATPAF2Q8N5M1 289 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 SLC15A4Q8N697 577 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 LRRC57Q8N9N7 239 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 KDM1BQ8NB78 822 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 PCDH19Q8TAB3 1148 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 DTX3LQ8TDB6 740 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 UBLCP1Q8WVY7 318 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-222ENST00000493919 GATAD2BQ8WXI9 593 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ST8SIA2Q92186 375 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 QKIQ96PU8 341 aaKnown RBP eCLIP11.22□□□□□ -0.61
BRCA1-222ENST00000493919 KCNJ15Q99712 375 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 DPYSL5Q9BPU6 564 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 EDEM2Q9BV94 578 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 TM6SF2Q9BZW4 377 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 HMG20AQ9NP66 347 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 PRSS16Q9NQE7 514 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 DNAJC11Q9NVH1 559 aa11.22□□□□□ -0.61
BRCA1-222ENST00000493919 ZSCAN32Q9NX65 697 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms