RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SNX6Q9UNH7 406 aa7.28□□□□□ -1.24
VEGFA-214ENST00000493786 SRPK3Q9UPE1 567 aa7.28□□□□□ -1.24
VEGFA-214ENST00000493786 NEUROG3Q9Y4Z2 214 aa7.28□□□□□ -1.24
VEGFA-214ENST00000493786 PCDHGA8Q9Y5G5 932 aa7.28□□□□□ -1.24
VEGFA-214ENST00000493786 PCDHGA11Q9Y5H2 935 aa7.28□□□□□ -1.24
VEGFA-214ENST00000493786 AK5Q9Y6K8 562 aa7.28□□□□□ -1.24
VEGFA-214ENST00000493786 AP1M2Q9Y6Q5 423 aa7.28□□□□□ -1.24
VEGFA-214ENST00000493786 KCNE1BA0A087WTH5 132 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 TMEM114B3SHH9 223 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 H0YGG7 62 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 OR7A17O14581 309 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ZSCAN9O15535 394 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 NDUFS4O43181 175 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 NPHS1O60500 1241 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 CPNE3O75131 537 aaKnown RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 SCRG1O75711 98 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 HSPA4LO95757 839 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 CHEK2O96017 543 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 KRT6AP02538 564 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 KRT6BP04259 564 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ENO1P06733 434 aaKnown RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ADRB1P08588 477 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 DHRS4L1P0CG22 281 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 FGF3P11487 239 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 FGF5P12034 268 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 TSPAN8P19075 237 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ITIH1P19827 911 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 GRK2P25098 689 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 SCTRP47872 440 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 KRT6CP48668 564 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ARSFP54793 590 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ARF3P61204 181 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 STXBP1P61764 594 aaKnown RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 SKP1P63208 163 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 CYP4F2P78329 520 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 PCDH1Q08174 1060 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 TRAF3Q13114 568 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 DDX39BQ13838 428 aaKnown RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 MPP2Q14168 576 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 CPSF6Q16630 551 aaKnown RBP eCLIP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 NDUFA9Q16795 377 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 FAM214AQ32MH5 1076 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 GGTA1PQ4G0N0 100 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 WASHC2DQ5SRD0 308 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 C10orf62Q5T681 223 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 YOD1Q5VVQ6 348 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 FBXO42Q6P3S6 717 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ZCCHC23Q6ZST2 131 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 RPS27LQ71UM5 84 aaKnown RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ERMP1Q7Z2K6 904 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ASPGQ86U10 573 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 MARCH9Q86YJ5 346 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 KIRREL3Q8IZU9 778 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 AFAP1L2Q8N4X5 818 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 BMPERQ8N8U9 685 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 L3MBTL4Q8NA19 623 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 OR4F6Q8NGB9 312 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 OR52B6Q8NGF0 335 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 OR1L3Q8NH93 324 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 RAB3IL1Q8TBN0 382 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 SLC13A3Q8WWT9 602 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 USP7Q93009 1102 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ZNF501Q96CX3 271 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 WDR34Q96EX3 536 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 FCRL4Q96PJ5 515 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 CDK15Q96Q40 435 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 CTRCQ99895 268 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 CENPKQ9BS16 269 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 GATA5Q9BWX5 397 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 SLC29A3Q9BZD2 475 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ULBP3Q9BZM4 244 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 GSTO2Q9H4Y5 243 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ELOVL6Q9H5J4 265 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 NT5DC2Q9H857 520 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ZBTB26Q9HCK0 441 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ACSS2Q9NR19 701 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 THSD1Q9NS62 852 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 TXLNGQ9NUQ3 528 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 INTS9Q9NV88 658 aaKnown RBP7.27□□□□□ -1.25
VEGFA-214ENST00000493786 TRPS1Q9UHF7 1281 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 PILRAQ9UKJ1 303 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ANGPTL2Q9UKU9 493 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 PCDHGA4Q9Y5G9 962 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 ANKRD12Q6UB98 2062 aa7.27□□□□□ -1.25
VEGFA-214ENST00000493786 A0A088AWK7 358 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 LOC105369274A0A096LPK9 316 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 LOC102723532A0A0G2JNH3 316 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 H0YIV9 168 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 FFAR3O14843 346 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 GPR42O15529 346 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 LCMT2O60294 686 aaKnown RBP7.26□□□□□ -1.25
VEGFA-214ENST00000493786 NRP2O60462 931 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 WFS1O76024 890 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 OR4F21O95013 312 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 ESRRBO95718 433 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 CHN1P15882 459 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 EPORP19235 508 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 SPINK2P20155 84 aa7.26□□□□□ -1.25
VEGFA-214ENST00000493786 ZNF10P21506 573 aaPredicted RBP7.26□□□□□ -1.25
VEGFA-214ENST00000493786 BGNP21810 368 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms