RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KRT33BQ14525 404 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CLCA4Q14CN2 919 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 DUOXA1Q1HG43 343 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 SFT2D3Q587I9 215 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 DUS1LQ6P1R4 473 aaKnown RBP13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 TICAM1Q8IUC6 712 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 OR4K1Q8NGD4 311 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 NELL1Q92832 810 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 GFM2Q969S9 779 aaKnown RBP13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CXorf40BQ96DE9 158 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 WDR92Q96MX6 357 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CCDC115Q96NT0 180 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 GBP5Q96PP8 586 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 SPNS1Q9H2V7 528 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 RHBGQ9H310 441 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CARS2Q9HA77 564 aaKnown RBP13.5□□□□□ -0.25
PTPN7-216ENST00000492977 POLMQ9NP87 494 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-216ENST00000492977 IMP3Q9NV31 184 aaKnown RBP13.5□□□□□ -0.25
PTPN7-216ENST00000492977 USP36Q9P275 1121 aaKnown RBP13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CNOT11Q9UKZ1 510 aaKnown RBP13.5□□□□□ -0.25
PTPN7-216ENST00000492977 PLEKHM1Q9Y4G2 1056 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 TCRBV5S2A0A599 114 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PDZK1P1A8MUH7 402 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 C10orf142B7Z368 130 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 RFXANKO14593 260 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 SCAMP2O15127 329 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PCDH7O60245 1069 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 GMNNO75496 209 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 TGFB1P01137 390 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 HOXB9P17482 250 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PKLRP30613 574 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 AKT2P31751 481 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 HPCAL1P37235 193 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 YPEL5P62699 121 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 MEF2AQ02078 507 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 LRRC74AQ0VAA2 488 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 TDGQ13569 410 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 MTX3Q5HYI7 312 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 GLYATQ6IB77 296 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 OR4F3Q6IEY1 312 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ENPP7Q6UWV6 458 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 WASH2PQ6VEQ5 465 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 COMMD6Q7Z4G1 85 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ADGRG5Q8IZF4 528 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 METTL4Q8N3J2 472 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ICA1LQ8NDH6 482 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 GPR156Q8NFN8 814 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 OR2T12Q8NG77 320 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 OR7A2PQ8NGA2 310 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 OR2L8Q8NGY9 312 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 HMGB4Q8WW32 186 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 LRTOMTQ8WZ04 291 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 BMFQ96LC9 184 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 BTBD9Q96Q07 612 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 CPPED1Q9BRF8 314 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ACAT2Q9BWD1 397 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 REXO4Q9GZR2 422 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 CD93Q9NPY3 652 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 HS3ST3A1Q9Y663 406 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 GNG14A0A1W2PPG7 69 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ANKDD1BA6NHY2 528 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 SCN2BO60939 215 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 SH3BGRLO75368 114 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 SEMA4FO95754 770 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 MTHFD1P11586 935 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 CD46P15529 392 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 GGT1P19440 569 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 CD72P21854 359 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 HRH2P25021 359 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PTPN6P29350 595 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 RPL3P39023 403 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 DGKEP52429 567 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 WNT3P56703 355 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 REEP5Q00765 189 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ZNF763Q0D2J5 394 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 RBBP5Q15291 538 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 SMAD2Q15796 467 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 RPE65Q16518 533 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 CYP51A1Q16850 503 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 TBCELQ5QJ74 424 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 CPTPQ5TA50 214 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ANXA8L1Q5VT79 327 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 IRGCQ6NXR0 463 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ABRAXAS1Q6UWZ7 409 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ARMCX6Q7L4S7 300 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ERMP1Q7Z2K6 904 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ANKRD46Q86W74 232 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 LINC01555Q8NAE3 123 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PAPD5Q8NDF8 572 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 TRPV3Q8NET8 790 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 VPS37AQ8NEZ2 397 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 OR10A6Q8NH74 314 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 OR1E3Q8WZA6 343 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PPWD1Q96BP3 646 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 COQ8BQ96D53 544 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms