RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 RHEBL1Q8TAI7 183 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 NEIL2Q969S2 332 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 NACC2Q96BF6 587 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 TM4SF19Q96DZ7 209 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 TMEM79Q9BSE2 394 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 CAPS2Q9BXY5 557 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 DRC3Q9H069 523 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 ALG9Q9H6U8 611 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 IGSF5Q9NSI5 407 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 GEMIN8Q9NWZ8 242 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 GPRC5BQ9NZH0 403 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 CD274Q9NZQ7 290 aa10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 PTRH2Q9Y3E5 179 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-206ENST00000492796 SMG1Q96Q15 3661 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 MGAQ8IWI9 3026 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 LOC400499M0QZD8 3231 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 IGLV3-12A0A075B6K2 115 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 FEZF1A0PJY2 475 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 SYCE1LA8MT33 242 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 POC1B-GALNT4F8VUJ3 575 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 H0YIG0 161 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 RIPK2O43353 540 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 CNOT3O75175 753 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 RFPL1O75677 317 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 STK16O75716 305 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 KLHL2O95198 593 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 MED26O95402 600 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 IGHEP01854 428 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 FAM87AP0C7U9 286 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 FBLP22087 321 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 CXCR2P25025 360 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 GSTM2P28161 218 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 AHRP35869 848 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 MAGEA12P43365 314 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 OR1D4P47884 311 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 AVPR1BP47901 424 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 RRADP55042 308 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 REEP5Q00765 189 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 IRF9Q00978 393 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 OCA2Q04671 838 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 DLG1Q12959 904 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 CDC16Q13042 620 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 KCNAB2Q13303 367 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 ACAP2Q15057 778 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 NKG7Q16617 165 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 CATSPEREQ5SY80 951 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 LGSNQ5TDP6 509 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 NXPE4Q6UWF7 544 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 LRRC70Q7Z2Q7 622 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 ISCA2Q86U28 154 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 METTL27Q8N6F8 245 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 EXD3Q8N9H8 876 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 TMEM102Q8N9M5 508 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLC13A3Q8WWT9 602 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 TSNARE1Q96NA8 513 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 ATOH8Q96SQ7 321 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 SPSB2Q99619 263 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 AIF1LQ9BQI0 150 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 TXLNGYQ9BZA5 131 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 DNAJC11Q9NVH1 559 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZNF282Q9UDV7 671 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 FETUBQ9UGM5 382 aa10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 PTBP2Q9UKA9 531 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-206ENST00000492796 GCN1Q92616 2671 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 VSTM2BA6NLU5 285 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SUPT3HB4E1H0 165 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 TAPBPO15533 448 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 NDUFS4O43181 175 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 FOXS1O43638 330 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 OR1F1O43749 312 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 LCMT2O60294 686 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SUPT3HO75486 399 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 NSA2O95478 260 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 UMODP07911 640 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 FAM153BP0C7A2 387 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 OTX2P32243 289 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 GDF5P43026 501 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SCTRP47872 440 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 HSPA7P48741 367 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SKP1P63208 163 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MEF2AQ02078 507 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 RGS1Q08116 209 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 PWP1Q13610 501 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 TSNAXIP1Q2TAA8 658 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 FAM153CQ494X1 144 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 FAM69BQ5VUD6 431 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 ATG9BQ674R7 924 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 TMEM214Q6NUQ4 689 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 NIPAL1Q6NVV3 410 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MED25Q71SY5 747 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MRGPREQ86SM8 312 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 DTWD1Q8N5C7 304 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 UHMK1Q8TAS1 419 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 NT5CQ8TCD5 201 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 UBTD2Q8WUN7 234 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 DCAKDQ8WVC6 231 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 KCTD4Q8WVF5 259 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 EXT2Q93063 718 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms