RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 SPRP35270 261 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-214ENST00000490398 SLC26A3P40879 764 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 SLC6A12P48065 614 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 RAB10P61026 200 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 RPS15AP62244 130 aaKnown RBP17.22■□□□□ 0.35
COL9A3-214ENST00000490398 KLC1Q07866 573 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 BMPR2Q13873 1038 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 CSHL1Q14406 222 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 SLMAPQ14BN4 828 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 MED25Q71SY5 747 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 TMEM102Q8N9M5 508 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-214ENST00000490398 MFSD9Q8NBP5 474 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 ZCCHC10Q8TBK6 192 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 SLC5A11Q8WWX8 675 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 ATL1Q8WXF7 558 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 ESAMQ96AP7 390 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 RHBDF1Q96CC6 855 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 UBXN10Q96LJ8 280 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 EGFL8Q99944 293 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 HAUS8Q9BT25 410 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 SLC25A23Q9BV35 468 aa17.22■□□□□ 0.35
COL9A3-214ENST00000490398 CDC42EP4Q9H3Q1 356 aaKnown RBP17.22■□□□□ 0.35
COL9A3-214ENST00000490398 MDC1Q14676 2089 aaKnown RBP17.21■□□□□ 0.35
COL9A3-214ENST00000490398 TNRC6AQ8NDV7 1962 aaKnown RBP17.21■□□□□ 0.35
COL9A3-214ENST00000490398 PABPN1LA6NDY0 278 aaKnown RBP17.21■□□□□ 0.35
COL9A3-214ENST00000490398 DNAJB6O75190 326 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 JRKO75564 520 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 B3GALT4O96024 378 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 ANXA5P08758 320 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 CD63P08962 238 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 SLC35E2BP0CK96 405 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 MMP11P24347 488 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 VARSP26640 1264 aaKnown RBP17.21■□□□□ 0.35
COL9A3-214ENST00000490398 CCR8P51685 355 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 CDKL1Q00532 357 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 DSG2Q14126 1118 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 TGFBIQ15582 683 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 DCAF10Q5QP82 559 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 GARNL3Q5VVW2 1013 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 TMEM214Q6NUQ4 689 aaKnown RBP17.21■□□□□ 0.35
COL9A3-214ENST00000490398 KIRREL2Q6UWL6 708 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 ADAMTSL2Q86TH1 951 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 ASPGQ86U10 573 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 PDSS2Q86YH6 399 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 KIF18AQ8NI77 898 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 MIEF2Q96C03 454 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 C8orf44Q96CB5 159 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 TSPAN17Q96FV3 270 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 CRB3Q9BUF7 120 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 YIPF2Q9BWQ6 316 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 DRC3Q9H069 523 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 EPN3Q9H201 632 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 TRPC4Q9UBN4 977 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 FBXL4Q9UKA2 621 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 ASB1Q9Y576 335 aa17.21■□□□□ 0.35
COL9A3-214ENST00000490398 OR1F1O43749 312 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 PRAMEF4O60810 478 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 ZIC2O95409 532 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-214ENST00000490398 IL1RNP18510 177 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 IRF9Q00978 393 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 PRAMEF9Q5VWM5 478 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 FRA10AC1Q70Z53 315 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 TMPRSS11BQ86T26 416 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 ZC3H7AQ8IWR0 971 aaKnown RBP17.2■□□□□ 0.34
COL9A3-214ENST00000490398 KLHDC8AQ8IYD2 350 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 SLC13A3Q8WWT9 602 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 MVB12AQ96EY5 273 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 IGSF5Q9NSI5 407 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 ZNF282Q9UDV7 671 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-214ENST00000490398 C3orf18Q9UK00 162 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 CDC14AQ9UNH5 594 aa17.2■□□□□ 0.34
COL9A3-214ENST00000490398 PCDHGA9Q9Y5G4 932 aaKnown RBP17.2■□□□□ 0.34
COL9A3-214ENST00000490398 OR2W5A6NFC9 320 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 J3QKU1 62 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 SGK494L7N484 410 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 AGPSO00116 658 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 KIF2AO00139 706 aaPredicted RBP17.19■□□□□ 0.34
COL9A3-214ENST00000490398 PEX12O00623 359 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 WDR47O94967 919 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 ACSL3O95573 720 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 TUBB4AP04350 444 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 SCTRP47872 440 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 CSRP3P50461 194 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 PGDP52209 483 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 REEP5Q00765 189 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 Q0VFX4 171 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 FAM53BQ14153 422 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 NADK2Q4G0N4 442 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 MROH9Q5TGP6 573 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 NXPE4Q6UWF7 544 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 GPSM1Q86YR5 675 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 RELL1Q8IUW5 271 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 ANKRD53Q8N9V6 530 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 CAMKVQ8NCB2 501 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 OR11G2Q8NGC1 345 aa17.19■□□□□ 0.34
COL9A3-214ENST00000490398 UHMK1Q8TAS1 419 aaKnown RBP17.19■□□□□ 0.34
COL9A3-214ENST00000490398 EXT2Q93063 718 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms