RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CHEK1O14757 476 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 LRP3O75074 770 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 RPS6KA5O75582 802 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GOT2P00505 430 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CCDC192P0DO97 292 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 EDNRAP25101 427 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ADRA1AP35348 466 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 SLC1A3P43003 542 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ALDH7A1P49419 539 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 MXI1P50539 228 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 SMSP52788 366 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 RPS8P62241 208 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 MZT1Q08AG7 82 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 SNTB2Q13425 540 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PNLIPRP3Q17RR3 467 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 KCNV1Q6PIU1 500 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PCSK4Q6UW60 755 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CWC27Q6UX04 472 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 VSTM1Q6UX27 236 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 RANBP10Q6VN20 620 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GCNT7Q6ZNI0 430 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ADGRD2Q7Z7M1 963 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ELOA2Q8IYF1 753 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 LGI4Q8N135 537 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 OR14A16Q8NHC5 309 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CAGE1Q8TC20 777 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 MIPOL1Q8TD10 442 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ZNF396Q96N95 335 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FAM213AQ9BRX8 229 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 MRPL37Q9BZE1 423 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 MOV10Q9HCE1 1003 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 C1RLQ9NZP8 487 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 TRBV5-3A0A0A0MS03 114 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 LILRA5A6NI73 299 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PSMD9O00233 223 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 MDM4O15151 490 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 SMAD6O43541 496 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CYTIPO60759 359 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 NKX2-2O95096 273 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 NDUFB10O96000 172 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 IGHG4P01861 327 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 OPN1LWP04000 364 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 TPSB2P20231 275 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 HSD17B3P37058 310 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PSMC4P43686 418 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CCNHP51946 323 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CTSCP53634 463 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 RRADP55042 308 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 EEF1A2Q05639 463 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 LCP2Q13094 533 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 DHX34Q14147 1143 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 TPSAB1Q15661 275 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PCK2Q16822 640 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GCNT6Q5T4J0 391 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 KRT39Q6A163 491 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 WBP2NLQ6ICG8 309 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ZSCAN25Q6NSZ9 544 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 LEG1Q6P5S2 330 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 MEPCEQ7L2J0 689 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ZC3HC1Q86WB0 502 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 CEP112Q8N8E3 955 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FGFBP3Q8TAT2 258 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 GUCD1Q96NT3 240 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 USP28Q96RU2 1077 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 FNDC4Q9H6D8 234 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 RPAP3Q9H6T3 665 aaPredicted RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 EXO5Q9H790 373 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PNRC2Q9NPJ4 139 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 PAPOLBQ9NRJ5 636 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 DBNLQ9UJU6 430 aaKnown RBP2.78□□□□□ -1.96
UBXN4-208ENST00000490163 STX8Q9UNK0 236 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 KCTD3Q9Y597 815 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 KCPQ6ZWJ8 1503 aa2.78□□□□□ -1.96
UBXN4-208ENST00000490163 ATRNO75882 1429 aa2.78□□□□□ -1.97
UBXN4-208ENST00000490163 UBR3Q6ZT12 1888 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 EVC2Q86UK5 1308 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 GOLGA6L19H0YKK7 550 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 PAX4O43316 350 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 FCMRO60667 390 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 RHOBTB1O94844 696 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 EPN2O95208 641 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CBX6O95503 412 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ESRRBO95718 433 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TXNDC12O95881 172 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 MOCS2O96007 188 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 PEPDP12955 493 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 F3P13726 295 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 SLC2A4P14672 509 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 MX1P20591 662 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 LOXP28300 417 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 SSTR1P30872 391 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 RANBP1P43487 201 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ZXDBP98169 803 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 BFSP2Q13515 415 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CUL2Q13617 745 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 RUNX2Q13950 521 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CEBPEQ15744 281 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ANXA2RQ3ZCQ2 193 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 FILIP1LQ4L180 1135 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms