RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 STX1BP61266 288 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 RPS13P62277 151 aaKnown RBP13.58□□□□□ -0.24
VPS26A-205ENST00000489656 RFTN2Q52LD8 501 aaPredicted RBP13.58□□□□□ -0.24
VPS26A-205ENST00000489656 ADNP2Q6IQ32 1131 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 ZCCHC8Q6NZY4 707 aaKnown RBP13.58□□□□□ -0.24
VPS26A-205ENST00000489656 SLC35F3Q8IY50 421 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.58□□□□□ -0.24
VPS26A-205ENST00000489656 TBC1D19Q8N5T2 526 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 ANKRD53Q8N9V6 530 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 FAM181AQ8N9Y4 354 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 OR6C4Q8NGE1 309 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 OR4C6Q8NH72 309 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 OR10G6Q8NH81 332 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 ZUFSPQ96AP4 578 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 C11orf24Q96F05 449 aaPredicted RBP13.58□□□□□ -0.24
VPS26A-205ENST00000489656 MARK4Q96L34 752 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 MTERF1Q99551 399 aaKnown RBP13.58□□□□□ -0.24
VPS26A-205ENST00000489656 SERPINI1Q99574 410 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 SLC38A3Q99624 504 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 RAB33BQ9H082 229 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 GAREM1Q9H706 876 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 ZIM2Q9NZV7 527 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 POMT2Q9UKY4 750 aa13.58□□□□□ -0.24
VPS26A-205ENST00000489656 EIF3LQ9Y262 564 aaKnown RBP13.58□□□□□ -0.24
VPS26A-205ENST00000489656 ANKDD1BA6NHY2 528 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 PSMD12O00232 456 aaPredicted RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 PCDHGA12O60330 932 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 SEC22BO75396 215 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 CLEC3AO75596 197 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 SEMA3DO95025 777 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 ETHE1O95571 254 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 PROS1P07225 676 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 EZRP15311 586 aaKnown RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 AMD1P17707 334 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 CALB2P22676 271 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 PTX3P26022 381 aaPredicted RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 MAPK1P28482 360 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 MPLP40238 635 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 DIO3P55073 304 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 RPL38P63173 70 aaKnown RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 BIRC2Q13490 618 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 CUL3Q13618 768 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 DDX39BQ13838 428 aaKnown RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 RBBP5Q15291 538 aaKnown RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 SPRED3Q2MJR0 410 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 SPIN4Q56A73 249 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 PLA2G2CQ5R387 149 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 ZNF761Q86XN6 746 aaPredicted RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 FAM9CQ8IZT9 166 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 MIER2Q8N344 545 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 RNF175Q8N4F7 328 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 CMTM5Q96DZ9 223 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 MS4A8Q9BY19 250 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 EPHA6Q9UF33 1036 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 TAGLN3Q9UI15 199 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 RAB23Q9ULC3 237 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 G3BP2Q9UN86 482 aaKnown RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 RUVBL1Q9Y265 456 aaKnown RBP13.57□□□□□ -0.24
VPS26A-205ENST00000489656 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
VPS26A-205ENST00000489656 VPS13AQ96RL7 3174 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 RHPN2P1A8MT19 583 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 HAT1O14929 419 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 OR1F1O43749 312 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 LCMT2O60294 686 aaKnown RBP13.56□□□□□ -0.24
VPS26A-205ENST00000489656 CBX6O95503 412 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 TBX6O95947 436 aaPredicted RBP13.56□□□□□ -0.24
VPS26A-205ENST00000489656 ZNF883P0CG24 379 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 PRPS2P11908 318 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 COX4I1P13073 169 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 PNLIPP16233 465 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 ARFIP1P53367 373 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 RPS15AP62244 130 aaKnown RBP13.56□□□□□ -0.24
VPS26A-205ENST00000489656 TBL3Q12788 808 aaKnown RBP13.56□□□□□ -0.24
VPS26A-205ENST00000489656 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 CACHD1Q5VU97 1274 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 IL23RQ5VWK5 629 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 FCRL6Q6DN72 434 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 LAIR1Q6GTX8 287 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 ARMC6Q6NXE6 501 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 GALNT18Q6P9A2 607 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 ADCK2Q7Z695 626 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 FAM20CQ8IXL6 584 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 MFSD9Q8NBP5 474 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 TRPV3Q8NET8 790 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 RP9Q8TA86 221 aaKnown RBP13.56□□□□□ -0.24
VPS26A-205ENST00000489656 TSPEARQ8WU66 669 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 CHTF18Q8WVB6 975 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 THAP11Q96EK4 314 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 APIPQ96GX9 242 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 ABCG4Q9H172 646 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 SEMA6CQ9H3T2 930 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 IL21RQ9HBE5 538 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 FSCN3Q9NQT6 498 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 LRIT1Q9P2V4 623 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 POLR3HQ9Y535 204 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms